DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and AT3G09620

DIOPT Version :10

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001327248.1 Gene:AT3G09620 / 820119 AraportID:AT3G09620 Length:990 Species:Arabidopsis thaliana


Alignment Length:620 Identity:188/620 - (30%)
Similarity:289/620 - (46%) Gaps:122/620 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEGDLDNEDYVPYVPVKERKKQHMIKLGRIVQ---LVSETAQPKSSSE-NENEDDSQGAHDVETW 75
            |.||            :.:|..:...||||:|   ..|:.::|||..: :.:|||          
plant   287 ETGD------------QAKKGFNKAALGRIIQGEDSDSDYSEPKSDDDPSLDEDD---------- 329

  Fly    76 GRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIKT 140
                     ::..:..|..:|:|||.|:.                         ..|:||...|.
plant   330 ---------EEFMKRVKKTKAEKLSLVDH-------------------------SKIEYEPFRKN 360

  Fly   141 AWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQV 205
            .:...:.|..|:::...|.|.||.:.|.|:....||:.:.:......||:.|.....:.|.|||.
plant   361 FYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQA 425

  Fly   206 QGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTH 270
            |.||.:::|||.||:|.|||||||.||||::....:|.   |.|..:||.||::.|:|||.:|.:
plant   426 QALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIY 487

  Fly   271 EIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDML---DKKILTLD 332
            ..|:.:||.|....:|      ..||..|::.:..:.||..|||.||||::|:|   ..||..|.
plant   488 SDIRKFSKALGIICVP------VYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLR 546

  Fly   333 MCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRA 397
            ...||.|||||||.|||||..:..|....:..|||:|||||.|::::..||..|.|||.|.||..
plant   547 RVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGR 611

  Fly   398 GAASMNVTQQVEYVKQEAKVVYLLDCLQK--TAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHG 460
            ...:.::||.||...:..:...||:.|.:  ....||:|...::                     
plant   612 SVVNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQE--------------------- 655

  Fly   461 GKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTK 525
                    :::..::....::|:||.||::|||...::.|:|:|.|:..|:||||:|||||:..|
plant   656 --------KSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK 712

  Fly   526 GLATTLINKTTEQSVLLDLKHLLIEGKQEVPD--------FLDELAPETEHQHLDLGDSHGCTYC 582
            |.|.|.|:: .:.....||...|...:|.|||        |:.::....|       .:||..| 
plant   713 GCAVTFISE-DDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIE-------QAHGTGY- 768

  Fly   583 GGLGHRIT--ECPKLEAVQNKQASNIGRRDYLSNT 615
            ||.|.:..  |....:|.:..||...|..:..|::
plant   769 GGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDS 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 91/207 (44%)
SF2_C_DEAD 404..532 CDD:350174 36/129 (28%)
AT3G09620NP_001327248.1 PTZ00121 <3..294 CDD:173412 3/18 (17%)
DEADc_DDX46 386..607 CDD:350711 95/229 (41%)
SF2_C_DEAD 618..719 CDD:350174 36/129 (28%)
KH-I_AtRH42_like 887..989 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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