DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and Ddx17

DIOPT Version :10

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_951062.1 Gene:Ddx17 / 67040 MGIID:1914290 Length:652 Species:Mus musculus


Alignment Length:489 Identity:175/489 - (35%)
Similarity:256/489 - (52%) Gaps:49/489 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 IREMSEEEREAVRHELRILVEGETPSP-PIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTV 211
            :..::..|.:.:|.:..|.|.|....| |:.:|....||:.:::.|..:....|||||.||.|..
Mouse    62 VARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLA 126

  Fly   212 LAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHY 276
            |:|||::|||.|||||||.::||.|:....|.|   .||.:||..|::.|:||||:|..::...|
Mouse   127 LSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY---LERGDGPICLVLAPTRELAQQVQQVADDY 188

  Fly   277 SKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDE 341
            .|    |.  .::|....||.|....:..:.|||.|.:||||||:|.|:.....|..|.||.:||
Mouse   189 GK----CS--RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDE 247

  Fly   342 ADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVT 405
            ||||:|||||..:|.|....:..||||::|||.||:::..|...|.....||||... :|:.|:.
Mouse   248 ADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNIL 312

  Fly   406 QQVEYV---KQEAKVVYLL-DCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEE 466
            |.|:..   :::.|::.|: :.:.:.....:||.|.|:..|.:...:...|..|:.|||.|.|.|
Mouse   313 QIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 377

  Fly   467 RSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTL 531
            |...::.:|.||..:|:||||||:|||..:|:.|||||.|:..|:||||||||.||..||.|.|.
Mouse   378 RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTF 442

  Fly   532 INKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLG----HRIT-- 590
            .....            ::..:|:...|:|.......:.:.|.|..|....||.|    :|.|  
Mouse   443 FTPGN------------LKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGKGGRSRYRTTSS 495

  Fly   591 ----------ECP-KLEAVQNKQASNIGRRDYLS 613
                      ||. :|..|::.     ||||..|
Mouse   496 ANNPNLMYQDECDRRLRGVKDG-----GRRDSTS 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 86/204 (42%)
SF2_C_DEAD 404..532 CDD:350174 53/131 (40%)
Ddx17NP_951062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
DEAD-like_helicase_N 32..502 CDD:475120 166/460 (36%)
Q motif 92..120 8/27 (30%)
DEAD box 246..249 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..652
Interaction with YAP1. /evidence=ECO:0000250|UniProtKB:Q92841 641..649
Blue background indicates that the domain is not in the aligned region.

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