DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and DDX41

DIOPT Version :9

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_057306.2 Gene:DDX41 / 51428 HGNCID:18674 Length:622 Species:Homo sapiens


Alignment Length:609 Identity:402/609 - (66%)
Similarity:493/609 - (80%) Gaps:12/609 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SEEGDLDNEDYVPYVPVKERKKQHMIKLGRIVQLVSETAQPKSSSENENED---DSQGAHDVETW 75
            ||..|.|:||||||||:::|::   :.|.:::|     .:.|.::|.|.:|   :.:|..|....
Human    23 SEAEDEDDEDYVPYVPLRQRRQ---LLLQKLLQ-----RRRKGAAEEEQQDSGSEPRGDEDDIPL 79

  Fly    76 GRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIKT 140
            |.:.|:||||||..||:.|||:|.||.||||:|||||:||:|:.:|||.|.|:||||.|:.||||
Human    80 GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144

  Fly   141 AWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQV 205
            :|.||||:..||||..|.||.:..|||||:...|||:||:|||||..||.||..|||.:|||||:
Human   145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQI 209

  Fly   206 QGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTH 270
            ||:||:|:|||:||||||||||||||.||||||.||||..|||.:.|||||||||||||||:|||
Human   210 QGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274

  Fly   271 EIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCR 335
            .|:::|.:.||....|.:|..|.:||:.|.|.::.|..|||::|||||||||:|.||:::||:||
Human   275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICR 339

  Fly   336 YLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAA 400
            ||.:||||||||||||.|:|||||:||||||||||||||||||||||:|||||||||||||||||
Human   340 YLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAA 404

  Fly   401 SMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQE 465
            |::|.|:|||||:|||:||||:|||||.||||||||||.|||.||||||||||||||||||||||
Human   405 SLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQE 469

  Fly   466 ERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATT 530
            ||::|::|:|.|||||||||||||||||||.:|||||||||::||||||||||||||...|:|||
Human   470 ERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATT 534

  Fly   531 LINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKL 595
            .|||..::|||:|||.||:|.||:||..|..|....|.. ||:|...||.:|||||||||:||||
Human   535 FINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESM-LDIGGERGCAFCGGLGHRITDCPKL 598

  Fly   596 EAVQNKQASNIGRRDYLSNTAADY 619
            ||:|.||.|||||:|||::::.|:
Human   599 EAMQTKQVSNIGRKDYLAHSSMDF 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc 179..393 CDD:238167 152/213 (71%)
DEXDc 192..397 CDD:214692 147/204 (72%)
Helicase_C 414..523 CDD:278689 93/108 (86%)
DDX41NP_057306.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 11/15 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..84 8/36 (22%)
SrmB 153..>566 CDD:223587 300/412 (73%)
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 181..209 18/27 (67%)
DEADc_DDX41 192..397 CDD:350709 146/204 (72%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 344..347 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152770
Domainoid 1 1.000 271 1.000 Domainoid score I1826
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9431
Inparanoid 1 1.050 803 1.000 Inparanoid score I500
Isobase 1 0.950 - 0 Normalized mean entropy S905
OMA 1 1.010 - - QHG53695
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 1 1.000 - - FOG0005487
OrthoInspector 1 1.000 - - oto91193
orthoMCL 1 0.900 - - OOG6_103442
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4314
SonicParanoid 1 1.000 - - X3903
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1514.890

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