DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abs and bel

DIOPT Version :10

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster


Alignment Length:578 Identity:198/578 - (34%)
Similarity:291/578 - (50%) Gaps:96/578 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QPKSSSENENE-----DDSQGAHDV----------ETWGRKYNISLLDQHTELKK----IAEAKK 98
            ||::....|.|     |.|:|....          |..|..||       :..|:    ..:..|
  Fly   196 QPRNDRWQEPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYN-------SRWKEGGGSNVDYTK 253

  Fly    99 LSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHEL 163
            |.|.:::|..|            |.||..  .||.::          :|             .::
  Fly   254 LGARDERLEVE------------LFGVGN--TGINFD----------KY-------------EDI 281

  Fly   164 RILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKT 228
            .:...|:...|.|.||.:::..:.|.|.:|......|||:|...:|.::.||||:..|.||||||
  Fly   282 PVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKT 346

  Fly   229 LVFVLPVI--MFAL--------EQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQAC 283
            ..|::|::  |:.|        .::||   .|.:.|.||::.|:||||.|..|..:.::..    
  Fly   347 AAFLVPILNQMYELGHVPPPQSTRQYS---RRKQYPLGLVLAPTRELATQIFEEAKKFAYR---- 404

  Fly   284 GMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDM 348
              ..:|..:..||...||.:..:.||.|::|||||||.||:.:..:.|:..|:|.:||||||:||
  Fly   405 --SRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDM 467

  Fly   349 GFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVE 409
            |||..:|.|.....    ||||||:||||.||:||..|...|...:.:.|||.|:.|.|:||.:.
  Fly   468 GFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTIL 532

  Fly   410 YVKQEAKVVYLLDCLQ--KTAPP------VLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEE 466
            :|.:..|..||||.|.  :..|.      .|||.|.|:..|.:.|:|........:|||.:.|:|
  Fly   533 WVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKE 597

  Fly   467 RSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTL 531
            |..|:..:|.|...:||||.||::|||.|:|:||||:|:|.|:|.||||||||||....|:||:.
  Fly   598 REEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSF 662

  Fly   532 INKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLD-LGDSHGCTYCGGLGHR 588
            .|: ..:::..||..||||.|||:|.|:::::.:..|.... .|...|..|.||.|.|
  Fly   663 FNE-KNRNICSDLLELLIETKQEIPSFMEDMSSDRGHGGAKRAGRGGGGRYGGGFGSR 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 85/218 (39%)
SF2_C_DEAD 404..532 CDD:350174 59/135 (44%)
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 94/278 (34%)
SF2_C_DEAD 527..663 CDD:350174 59/135 (44%)

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