DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and CG7483

DIOPT Version :9

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster


Alignment Length:396 Identity:122/396 - (30%)
Similarity:199/396 - (50%) Gaps:23/396 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 VEGETPS--PPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTL 229
            ||.||..  ..|.:|..|...:.:|.|:.|.|.:.|:.||.:.:..::.|||:|..|.:|:|||.
  Fly    14 VEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTA 78

  Fly   230 VFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAM 294
            .|.:.::.       ||.....|... |.:.|:||||.|..::|      |....|..::..:.:
  Fly    79 TFSISILQ-------SLDTTLRETQV-LCLSPTRELAVQIQKVI------LALGDMMNVQCHVCI 129

  Fly   295 GGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFS 359
            ||..:.|.:..:..|.|||..||||:.||:.:::|.....:.|.:||||.|::.||:|.:..::.
  Fly   130 GGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 194

  Fly   360 FFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEA----KVVYL 420
            :.....|.:|.|||:|.:|.......:..|:.|.|.|.......:.|....|::|.    .:..|
  Fly   195 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 259

  Fly   421 LDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVAT 485
            .|.|  |....:||...|:.||.:.|.:........::||...|:||...:..:|.|:..||:.|
  Fly   260 YDTL--TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITT 322

  Fly   486 DVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIE 550
            ||.::|:|...|..|||||:|::.|.|:|||||:||...||:|...: |:.:..:|.|::.....
  Fly   323 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-KSDDIRILRDIEQYYST 386

  Fly   551 GKQEVP 556
            ...|:|
  Fly   387 QIDEMP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc 179..393 CDD:238167 63/213 (30%)
DEXDc 192..397 CDD:214692 61/204 (30%)
Helicase_C 414..523 CDD:278689 41/112 (37%)
CG7483NP_649788.2 PTZ00424 4..399 CDD:185609 122/396 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451779
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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