Protein Alignment abs and CG7878

DIOPT Version :10

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_649767.1
• Gene: CG7878 / 40959
• FlyBaseID: FBgn0037549
• Length: 703
• Species: Drosophila melanogaster
• Alignment Length: 590
• Identity: 176/590 - (29%)
• Similarity: 295/590 - (50%)
• Gaps: 57/590 - (9%)

  Fly    28 VPVKERKKQHMIKL-----GRIVQLVSETAQPKSSSENENEDDSQGAHDVETWGRKYNISLLDQH 87
            |.||..|...::|:     ..::..::...:..::|.:..:|.....|..   ..:|:....|::
  Fly   122 VRVKLDKCDLIVKITGSIQSNVIDAINHVRKQVTNSGDRGQDRDNRDHGS---NERYDGGGYDRY 183

  Fly    88 TELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQ--PI-KTAWKPPRYIR 149
            .     ..:.:.:....:..::...:..|...:||...:..|...::.:  |: |..:|....:.
  Fly   184 K-----GNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEVA 243

  Fly   150 EMSEEEREAVRHE-LRILV-------EGETPSP---PIRSFRE--MKFPKGILNGLAAKGIKNPT 201
            .:::.|.|.:|.| .:|.|       ||||..|   |:.:|.:  .::| .:|..:...|...|:
  Fly   244 NLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYP-DMLEEITKMGFSKPS 307

  Fly   202 PIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEY-SLPFERNEGPYGLIICPSREL 265
            |||.|..|.:|.|.|:||||.||:||||.|:||.:   :..|| |.|.....|...|::.|:|||
  Fly   308 PIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM---IHTEYQSTPRGTRGGANVLVLAPTREL 369

  Fly   266 AKQTHEIIQHYSKHLQACGMPEIRSCLAMGG---LPVSEALDVISRGVHIVVATPGRLMDMLDKK 327
            |.|....::.||..    ||..:  |:..||   :.:|:    :.||..|::.|||||.|::...
  Fly   370 ALQIEMEVKKYSFR----GMKAV--CVYGGGNRNMQISD----LERGAEIIICTPGRLNDLIMAN 424

  Fly   328 ILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTI 392
            ::.:....||.:||||||:|||||..:|.:....:..|||::.|||.|..::..|:|.:..|:.:
  Fly   425 VIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQV 489

  Fly   393 NVGRAG-AASMNVTQQVEYVKQEAKVVYLLDCLQK---TAPPVLIFAEKKQDVDCIHEYLLLKGV 453
            .||... ||:.:|.|.::.::.:......:....|   :...::||..:|...|.:...|.|.|.
  Fly   490 CVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGF 554

  Fly   454 EAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGR 518
            ....|||.:||.:|.:|:...:.|...:||||||||:|||..::.||||||.|.:||.||||:||
  Fly   555 MTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGR 619

  Fly   519 TGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCG 583
            |||:..:|.:.:...: .:.::..:|..:|.|.:|||||.|..:|...:... |...:.|    |
  Fly   620 TGRAGRQGTSISFFTR-EDWAMAKELIEILQEAEQEVPDELHNMARRFKAMK-DKRAAEG----G 678

  Fly   584 GLGHR 588
            |.|.|
  Fly   679 GFGGR 683

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	77/208 (37%)
		SF2_C_DEAD	404..532	CDD:350174	48/130 (37%)
CG7878	NP_649767.1	KH_1	92..152	CDD:459630	5/29 (17%)
		DEAD-like_helicase_N	174..663	CDD:475120	161/508 (32%)