Protein Alignment abs and Rm62

DIOPT Version :9

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Alignment Length: 471
• Identity: 174/471 - (36%)
• Similarity: 252/471 - (53%)
• Gaps: 35/471 - (7%)

  Fly   125 VAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGIL 189
            :|...|....|.|         .:...|..|.:..|.|..|.|.|:.|: ||:.|.|:..|..::
  Fly   239 LAPFKKNFYQEHP---------NVANRSPYEVQRYREEQEITVRGQVPN-PIQDFSEVHLPDYVM 293

  Fly   190 NGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGP 254
            ..:..:|.|.||.||.||.|..::|.:.:|||.|||||||.::||.|:....|:   |.:|.:||
  Fly   294 KEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQ---PLQRGDGP 355

  Fly   255 YGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGR 319
            ..|::.|:||||:|..::...:.      ....:|:....||.|....:..:.||..||:|||||
  Fly   356 IALVLAPTRELAQQIQQVATEFG------SSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGR 414

  Fly   320 LMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARS 384
            |:|.|......|..|.||.:||||||:|||||..:|.|.|..:..||||::|||.||:::..|..
  Fly   415 LIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAED 479

  Fly   385 ALVKPVTINVGRAG-AASMNVTQQV----EYVKQEAKVVYLLDCLQKTAPP--VLIFAEKKQDVD 442
            .|...:.||:|... :|:.|:.|.|    |:.|:|.....|.|....:..|  ::||.|.|:.||
  Fly   480 FLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVD 544

  Fly   443 CIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPD 507
            .:..::...||...||||.|.|.||...:..:|.||.::|||||||::|||...:::|||:|.|.
  Fly   545 NLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQ 609

  Fly   508 DIENYVHRIGRTGRSNTKGLATTLI--NKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQH 570
            :.|:|:|||||||||||||.:....  |...:...|:|   :|.|..||:...|:.||..:.:.
  Fly   610 NSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVD---VLREANQEINPALENLARNSRYD- 670

  Fly   571 LDLGDSHGCTYCGGLG 586
               |......|.||.|
  Fly   671 ---GGGGRSRYGGGGG 683

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc	179..393	CDD:238167	83/213 (39%)
		DEXDc	192..397	CDD:214692	83/204 (41%)
		Helicase_C	414..523	CDD:278689	48/110 (44%)
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	152/387 (39%)
		DEADc	283..488	CDD:238167	83/213 (39%)
		HELICc	499..633	CDD:238034	58/133 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451750
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR47958
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940