Protein Alignment abs and Gem3

DIOPT Version :9

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_001261678.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Alignment Length: 396
• Identity: 113/396 - (28%)
• Similarity: 184/396 - (46%)
• Gaps: 29/396 - (7%)

  Fly   155 EREAVRHELRILVEGETPSPP--IRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDL 217
            ||| :.|.|....|..:...|  :::|.|::..:.:||||.......||.||...:|..||..||
  Fly     2 ERE-IAHSLAGGEERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDL 65

  Fly   218 IGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERN-EGPYGLIICPSRELAKQTHEIIQHYSKHLQ 281
            |..:.:|:||||::|:.|:.         .|..| ..|:.:|:.|:||||.|..:...|..|..:
  Fly    66 IIQSKSGTGKTLIYVIAVVQ---------SFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFR 121

  Fly   282 ACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMI 346
                 :.:....:||..|::....::.. .:::.|||||:.:.:.::..:...|.|.:||||::.
  Fly   122 -----DFKCSAFIGGTDVAKDRKRMNES-RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLY 180

  Fly   347 D-MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEY 410
            . ...:..|..:.......||.:..|||..:.:.......:.||:.|:........:.:.|.|..
  Fly   181 QTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYE 245

  Fly   411 VKQEAKVV-------YLLDCLQKTAP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEE 466
            :.|:...|       .:|..:....|  ..:|||..:...|....||...|::...|.|..:|.|
  Fly   246 LPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSE 310

  Fly   467 RSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTL 531
            |....:.||.....:|||||:.::|:|.|:...|||.|.|.|...|:|||||.||..:||:|.|.
  Fly   311 RLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITF 375

  Fly   532 INKTTE 537
            |....|
  Fly   376 IASKKE 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc	179..393	CDD:238167	57/215 (27%)
		DEXDc	192..397	CDD:214692	53/206 (26%)
		Helicase_C	414..523	CDD:278689	39/117 (33%)
Gem3	NP_001261678.1	SrmB	24..541	CDD:223587	106/373 (28%)
		P-loop_NTPase	27..228	CDD:304359	57/215 (27%)
		Helicase_C	259..367	CDD:278689	38/107 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451718
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR47958
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940