DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and me31B

DIOPT Version :10

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster


Alignment Length:364 Identity:118/364 - (32%)
Similarity:184/364 - (50%) Gaps:34/364 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 FREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQ- 242
            |.|....:.:|.|:..||.:.|:|||...:|..|:|:|::..|..|:|||..:.:||    ||| 
  Fly    60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPV----LEQI 120

  Fly   243 ----EYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEAL 303
                :|.         ..|::.|:||||.||.:|....:|||      :||..:..||..:.:.:
  Fly   121 DPTKDYI---------QALVMVPTRELALQTSQICIELAKHL------DIRVMVTTGGTILKDDI 170

  Fly   304 DVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTL 368
            ..|.:.|.:::|||||::|::|||:..:..||.|.:||||:::.:.|:..:..:........|.|
  Fly   171 LRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQIL 235

  Fly   369 LFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPV-- 431
            |||||.|..::||....|.:|..||: ........|||...:|::..||    .||......:  
  Fly   236 LFSATFPLTVKNFMEKHLREPYEINL-MEELTLKGVTQYYAFVQERQKV----HCLNTLFSKLQI 295

  Fly   432 ---LIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLD 493
               :||....|.|:.:.:.:...|.....||....|..|:|....:|.|....||.:|:.::|:|
  Fly   296 NQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGID 360

  Fly   494 FPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLI 532
            ...|..|||:|.|...|.|:|||||:||....|:|..||
  Fly   361 VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 70/209 (33%)
SF2_C_DEAD 404..532 CDD:350174 42/132 (32%)
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 118/364 (32%)
DEADc_DDX6 60..260 CDD:350698 72/218 (33%)

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