Protein Alignment abs and Ddx56

DIOPT Version :10

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Alignment Length: 498
• Identity: 122/498 - (24%)
• Similarity: 207/498 - (41%)
• Gaps: 95/498 - (19%)

  Fly   179 FREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVI------- 236
            |.|::..:.||..:|..|.:.||.||...:|.:|.|:|::..|.||||||..:.||:|
  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSK 75

  Fly   237 MFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSE 301
            :.|.||..|          .:::.|::||.:|:.::|:..   :::||.....:.:|........
  Fly    76 LNASEQYVS----------AVVLAPTKELCRQSRKVIEQL---VESCGKVVRVADIADSSNDTVT 127

  Fly   302 ALDVISRGVHIVVATPGRLMDMLDK-KILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQR 365
            ....:|....||||||..|:...:. .::.|.....|.:||||.:...|:|:|.:.:........
  Fly   128 QRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIY 192

  Fly   366 QTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQE--------------AK 416
            |.:|.|||:...:.......|..|||:.:           ::.|.|.|:              ..
  Fly   193 QAVLVSATLTDDVVRMKGLCLNNPVTLKL-----------EEPELVPQDQLSHQRILAEENDKPA 246

  Fly   417 VVYLLDCLQKTAPPVLIFAEKKQDVD-CIHEYLLLK--GVEAVAIHGGKDQEERSRAVDAYRVGK 478
            ::|.|..|:......:||.   ..:| |....|.|:  |:.|..::.......|...:..:..|.
  Fly   247 ILYALLKLRLIRGKSIIFV---NSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGT 308

  Fly   479 KDVLVATD-------------------------VASKGLDFPNVQHVINYDMPDDIENYVHRIGR 518
            .|:::|:|                         .||:|:||..|.:|||:|.|.|:.:|:||.||
  Fly   309 YDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGR 373

  Fly   519 TGRSNTKG-------LATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDS 576
            |.|.|.||       :..:.:|.:.|:. |.| .....||:|.:.::..::......::......
  Fly   374 TARGNNKGSVLSFVSMKESKVNDSVEKK-LCD-SFAAQEGEQIIKNYQFKMEEVESFRYRAQDCW 436

  Fly   577 HGCTYCGGLGHRITE-------CPKLEAV--QNKQASNIGRRD 610
            ...|.......||.|       |.||:|.  :||:.....|.|
  Fly   437 RAATRVAVHDTRIREIKIEILNCEKLKAFFEENKRDLQALRHD 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	60/212 (28%)
		SF2_C_DEAD	404..532	CDD:350174	41/176 (23%)
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	60/217 (28%)
		SF2_C_DEAD	232..387	CDD:350174	38/157 (24%)