DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abs and CG32344

DIOPT Version :9

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:408 Identity:126/408 - (30%)
Similarity:207/408 - (50%) Gaps:23/408 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 FREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQE 243
            |:.|.....::.|:..:|.|.|||||.:.:|.:|.|||::.:|.||||||..|::|  :|...|.
  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIP--LFEKLQR 103

  Fly   244 YSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISR 308
            .    |..:|...||:.|:||||.||::.|:...:.:      |::|.|.:||..:......|..
  Fly   104 R----EPTKGARALILSPTRELAVQTYKFIKELGRFM------ELKSILVLGGDSMDSQFSAIHT 158

  Fly   309 GVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSAT 373
            ...::||||||.:.:..:..|.|:...|:..|||||:.:|||.|.:..........|||::||||
  Fly   159 CPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSAT 223

  Fly   374 MPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAP---PVLIFA 435
            :||.:..|||:.|..||.|.:.........:..:..|.:.:.:...|:..|:...|   ..::||
  Fly   224 LPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPDDRYTALVVLLKYVIPVQSQTVVFA 288

  Fly   436 EKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHV 500
            ..:..|:.|...|...|:...:::...|...|......:...|..||:.||||::|:|.|::..|
  Fly   289 GTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFV 353

  Fly   501 INYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPD--FLDELA 563
            :|...|...:.:|||:||..|:...|.|.:::: |.:.:.|||| ||.:.....:.|  .|..:.
  Fly   354 VNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVS-TDDTAHLLDL-HLFLNRPFNIHDSSALGTIP 416

  Fly   564 PE-TEHQHL---DLGDSH 577
            .: .|.:||   |:..||
  Fly   417 QDLLEEEHLTVTDIKKSH 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc 179..393 CDD:238167 77/213 (36%)
DEXDc 192..397 CDD:214692 75/204 (37%)
Helicase_C 414..523 CDD:278689 30/111 (27%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 77/213 (36%)
DEXDc 54..243 CDD:214692 74/200 (37%)
HELICc 263..384 CDD:238034 32/120 (27%)
DBP10CT 666..721 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.