DRSC/TRiP Functional Genomics Resources

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Protein Alignment abs and ddx3xb

DIOPT Version :10

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_005168845.2 Gene:ddx3xb / 30116 ZFINID:ZDB-GENE-980526-150 Length:721 Species:Danio rerio


Alignment Length:532 Identity:189/532 - (35%)
Similarity:273/532 - (51%) Gaps:90/532 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 RYIREMSEEE-------REAVRHEL--------------RILVE--GETPSPPIRSFREMKFPKG 187
            |::.|..:|:       .|.:.|||              .|.||  |.....||.||.:::..:.
Zfish   170 RWVEECRDEDWSKPLPPNERLEHELFSGSNTGINFEKYDDIPVEATGHNGPQPIDSFHDLEMGEI 234

  Fly   188 ILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIM--------FALE--- 241
            |:..:.......|||:|...:|.:.:.|||:..|.||||||..|:|||:.        .||:   
Zfish   235 IMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQAAK 299

  Fly   242 ---QEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEAL 303
               ||......|.:.|..|::.|:||||.|.::..:.:|..      ..:|.|:..||..:.:.:
Zfish   300 NSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYR------SHVRPCVVYGGADIGQQI 358

  Fly   304 DVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFF----KGQ 364
            ..:.||.|::|||||||:||:::..:.||.|.||.:||||||:|||||..:|.|....    ||.
Zfish   359 RDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGL 423

  Fly   365 RQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAP 429
            |||::||||.||:||..||..|...:.:.|||.|:.|.|:||:|.:|::..|..:|||.|..|..
Zfish   424 RQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATVI 488

  Fly   430 P-------------------VLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYR 475
            |                   .|:|.|.|:..|.:.::|..:|....:|||.:.|.:|..|:..:|
Zfish   489 PSEVQESTGESVEKPGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFR 553

  Fly   476 VGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSV 540
            .|:..:||||.||::|||..||:||||:|:|.|||.||||||||||....||||:..| ....::
Zfish   554 SGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-DKNGNI 617

  Fly   541 LLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKLEAVQNKQASN 605
            ..||..:|:|.|||||.:|:.||  .||||..........:.||                     
Zfish   618 TKDLLDILVEAKQEVPSWLESLA--YEHQHKSSSRGRSKRFSGG--------------------- 659

  Fly   606 IGRRDYLSNTAA 617
            .|.|||..|:::
Zfish   660 FGARDYRQNSSS 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 84/222 (38%)
SF2_C_DEAD 404..532 CDD:350174 60/146 (41%)
ddx3xbXP_005168845.2 None

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