Protein Alignment abs and Ddx23

DIOPT Version :9

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_001100263.2
• Gene: Ddx23 / 300208
• RGDID: 1308685
• Length: 819
• Species: Rattus norvegicus
• Alignment Length: 621
• Identity: 203/621 - (32%)
• Similarity: 317/621 - (51%)
• Gaps: 83/621 - (13%)

  Fly     5 KRYRRSSKSSEEGDLD-NEDYVPYVPVKERKKQ----HMIKLGRIVQLVSETAQPKSSSENE--- 61
            :|.||..:...|.:.: |||......::|.|.:    |.|| .|.:..:.:..:.:..::.:
  Rat   210 ERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIK-ERYLGGIKKRRRTRHLNDRKFVF 273

  Fly    62 ----NEDDS-------QGAHDVETWGRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMES 115
                :||.|       :..|.|:..||.:...:     :||:  :.::.|.....|.|:.:.:|.
  Rat   274 EWDASEDTSIDYNPLYKERHQVQLLGRGFIAGI-----DLKQ--QKREQSRFYGDLMEKRRTLEE 331

  Fly   116 IAQQKALMGVAELAKGIQYEQPIKTAWKPPRY----IREMSEEEREAVRHELRILVEGETPSPPI 176
            ..|::|.:  .:|.|     :..|..|....:    :.||::.:....|.:..|..:|.....||
  Rat   332 KEQEEARL--RKLRK-----KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPI 389

  Fly   177 RSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALE 241
            ||:::...|..||..:...|.|.|||||.|.:|..|..||:||:|.||||||..|::|::::..
  Rat   390 RSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWIT- 453

  Fly   242 QEYSLP-----FERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSE 301
               :||     .|.::|||.:|:.|:||||:|..|....:.|.|      .||:...:||:...:
  Rat   454 ---TLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL------GIRTVAVIGGISRED 509

  Fly   302 ALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIF-------- 358
            ....:..|..||:||||||:|:|:.:.|.|..|.|:.:||||||||||||.||:.|.
  Rat   510 QGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 574

  Fly   359 ---------------SFFKGQ---RQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVT 405
                           :|..|:   |||::|:||||..::..|||.|.:|..:.:|.||.....|.
  Rat   575 KPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVE 639

  Fly   406 QQVEYVKQEAKVVYLLDCL-QKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSR 469
            |:|..:.:..|...||..| |...||::||..:|:..|.:.:.|...|..|..:||||.||:|..
  Rat   640 QKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREF 704

  Fly   470 AVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINK 534
            |:...:.|.||:|||||||.:|:|..:|..|:||||..:||:|:||||||||:...|:|.|.:.|
  Rat   705 ALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTK 769

  Fly   535 TTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQH 570
             .:.:|..:||..::|  ..|.....|||...:.||
  Rat   770 -EDSAVFYELKQAILE--SPVSSCPPELANHPDAQH 802

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc	179..393	CDD:238167	91/244 (37%)
		DEXDc	192..397	CDD:214692	89/235 (38%)
		Helicase_C	414..523	CDD:278689	51/109 (47%)
Ddx23	NP_001100263.2	SF-CC1	79..>207	CDD:273721
		DEADc_DDX23	401..627	CDD:350703	90/235 (38%)
		SF2_C_DEAD	638..767	CDD:350174	57/128 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D183201at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920