Protein Alignment abs and ddx-17

DIOPT Version :10

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_001041134.1
• Gene: ddx-17 / 179897
• WormBaseID: WBGene00010260
• Length: 561
• Species: Caenorhabditis elegans
• Alignment Length: 429
• Identity: 167/429 - (38%)
• Similarity: 239/429 - (55%)
• Gaps: 24/429 - (5%)

  Fly   164 RILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKT 228
            ::.:||.....|:..|.|...| |.::.|.....:.||.||....|..::|||:|.||.||||||
 Worm   117 QVTLEGRGVPRPVFEFNEAPLP-GQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKT 180

  Fly   229 LVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLA 293
            |.|:||.::...:|.:.   :|.|||..|::.|:||||:|..|:...:...|   |:.  .:||.
 Worm   181 LAFMLPALVHITKQAHR---QRGEGPAVLVLLPTRELAQQVQEVSIDFCHSL---GLK--MTCLF 237

  Fly   294 MGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIF 358
            .|.....:|.| :.|||.|||||||||:|.||.....:..|.||.:||||||:|||||..::.|.
 Worm   238 GGASKGPQARD-LERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKII 301

  Fly   359 SFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQVEYVKQEAKVVYLLD 422
            ...:..||||:||||.||:::..|.........:|||... ||:.|:||.|:.:::.||...|::
 Worm   302 GQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLME 366

  Fly   423 CL-----QKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVL 482
            .|     ||.. ..:||.|.|:..|.:...:...|...:.|||.|:|.||...:..::.||..::
 Worm   367 LLNHIMNQKEC-KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIM 430

  Fly   483 VATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHL 547
            :|||||::|||..:::.|||||.|::.|:|||||||||||:.||.|.|.... |..|...||..:
 Worm   431 LATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTH-TNASKAKDLLKV 494

  Fly   548 LIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLG 586
            |.|.||.||..|.::|      :...|.|:.....||.|
 Worm   495 LDEAKQTVPQALRDMA------NRSYGGSNSRGRYGGGG 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	83/204 (41%)
		SF2_C_DEAD	404..532	CDD:350174	54/132 (41%)
ddx-17	NP_001041134.1	DEAD-like_helicase_N	77..538	CDD:475120	167/429 (39%)