Protein Alignment abs and C46F11.4

DIOPT Version :10

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_497743.1
• Gene: C46F11.4 / 175469
• WormBaseID: WBGene00008119
• Length: 811
• Species: Caenorhabditis elegans
• Alignment Length: 702
• Identity: 205/702 - (29%)
• Similarity: 321/702 - (45%)
• Gaps: 149/702 - (21%)

  Fly    10 SSKSSEEGDLDNEDYVPYVP--------------------VKERKKQHMIKLGRIVQLV------ 48
            |:|||....|.:...:..||                    :..||:|.|.|......|:
 Worm    16 SAKSSGTSSLSDGKSMNNVPPPAALTVGNAPVPPPNRNILLSNRKEQEMKKEQEYANLMAYGSTS 80

  Fly    49 ------------------SETAQPKSSSENENEDDSQGAHDVETWGRKYNISLLDQHTEL----- 90
                              |:..:|.|||.....||.                  |:..||
 Worm    81 EKQSRRKRIYDDEYLEGGSDDEKPASSSSKLAADDD------------------DEEDELDAFMA 127

  Fly    91 ---KKIAEAKKLSAVEKQLREEEKIMESIAQ-------------QKALMGVAELAK--------G 131
               |:.:..||:|..:::.|:|.|..|..::             |::|....|..|        .
 Worm   128 GIEKQASSDKKVSEQKEKDRKEGKDTEDPSKKGLGRADIDEEDMQESLFKFMEEYKEKHENDDEQ 192

  Fly   132 IQYEQPIKTAWKPPRYIREMSE----------------EEREAVR-----------HELRILVEG 169
            ::|::.....|...:.|..:.:                ||.|.::           :.:.:.|.|
 Worm   193 LEYDEDGNIIWSWKKVIDPLPDIDHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGG 257

  Fly   170 ETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLP 234
            ..|..|:.||....|.|.::..:.....:.|||||...:|:.|:|||::|||.||||||..::.|
 Worm   258 LKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322

  Fly   235 VIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRS-CLAMGGLP 298
            .|:..::|.   ..:..|||..:|:.|:||||      ||.:.:..:.|.:..|.. |...||..
 Worm   323 AIVHIMDQP---DLKAGEGPVAVIVVPTRELA------IQVFQEAKKFCKVYNINPICAYGGGSK 378

  Fly   299 VSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKG 363
            ..::.::.:.|..:||.||||::|::...........:|..||||||.|||||..|::|....:.
 Worm   379 WEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRP 443

  Fly   364 QRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVK-QEAKVVYLLDCLQKT 427
            .||.|:||||..:|::..||.|||.||.|..|..|.|:.::.|:|..:: |:.|:.:|:..|.:.
 Worm   444 DRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRNLVEF 508

  Fly   428 AP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASK 490
            |.  .||||..||.|.:.:.:.|.:|..:.|.:||...|.||:..:..:| .|..:|||||||::
 Worm   509 ASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFR-KKSQILVATDVAAR 572

  Fly   491 GLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLL--IEG-K 552
            |||...::.|||:||..||:.:|||||||||:..||.|.||:   ||:.:.: :.||:  :|. .
 Worm   573 GLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLV---TEKDIEM-VGHLVKNLESVS 633

  Fly   553 QEVPDFLDELAPETE----HQHLDLGDSHGCTYCG--GLGHRITECPKLEAV 598
            ||||..|.:||.::.    .:..:.|.|.|....|  |||:    .||:..|
 Worm   634 QEVPKPLMDLAMKSSWFRGQRAGNGGPSTGTQTRGRMGLGY----TPKVRQV 681

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	75/205 (37%)
		SF2_C_DEAD	404..532	CDD:350174	54/130 (42%)
C46F11.4	NP_497743.1	SrmB	266..669	CDD:440279	153/416 (37%)