Protein Alignment abs and sacy-1

DIOPT Version :10

• Sequence 1: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Sequence 2: NP_491962.1
• Gene: sacy-1 / 172413
• WormBaseID: WBGene00019245
• Length: 630
• Species: Caenorhabditis elegans
• Alignment Length: 612
• Identity: 326/612 - (53%)
• Similarity: 427/612 - (69%)
• Gaps: 27/612 - (4%)

  Fly     8 RRSSKSSEEGDLDNEDYVPYVPVKERKKQHMIKLGRIVQLVSETAQPKSSSE---NENEDDSQGA 69
            ||...:...||.|.:....::...:||::.:.:...:.|:::.|...|...|   .:.|:|.|..
 Worm    27 RRDGMNLSSGDDDQDVDDMFLTALQRKREKVHRRALLKQVLAPTMNQKEEIERKRKKKEEDKQSE 91

  Fly    70 HDVETWGRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQY 134
            .     .||   :||::|.|:.:....  :...|:||.|||::::.:.:...|:.||||.||.:|
 Worm    92 E-----ARK---TLLEKHAEIMETQGV--IDESERQLMEEEELLDKVTRGGGLLAVAELTKGEKY 146

  Fly   135 EQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGL-AAKGIK 198
            |:||.|||:||.:||..|:|:.|..|..|.|..||:...|||.||.||||||.:|..: ..|||.
 Worm   147 EEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIV 211

  Fly   199 NPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSR 263
            .||.||:||:|..|:|||:||||.||||||:.||||::||.||||..|||.|:|||:||||.|||
 Worm   212 TPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSR 276

  Fly   264 ELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKI 328
            |||:|..::|......|...|:||:|:.|.:||:|:.|....:..|:||||||||||.|||.|||
 Worm   277 ELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKI 341

  Fly   329 LTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTIN 393
            :.|::||||.:||||||:|||||:::::||.|||.||||||||||||:|||.||:||||||:.:|
 Worm   342 INLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVN 406

  Fly   394 VGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAI 458
            ||||||||:||.|::|:|:.|.|:|.:|:|||||:|.||||||||.|||.|:||||:||||..:|
 Worm   407 VGRAGAASLNVLQELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASI 471

  Fly   459 HGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSN 523
            ||||||.:|...::|:|..:||||||||||||||||..::||||:|||:|||||||||||||||.
 Worm   472 HGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSG 536

  Fly   524 TKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDS-------HGCTY 581
            .||||||.|||.:|.|||.|||.||.|..||:|:||..||.:.|      |.:       .||.|
 Worm   537 RKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLAGDEE------GTAPAGTNAEKGCAY 595

  Fly   582 CGGLGHRITECPKLEAVQNKQASNIGR 608
            |.|||||||:||||..:.||....:.|
 Worm   596 CSGLGHRITDCPKLAGIGNKTTQALAR 622

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	125/205 (61%)
		SF2_C_DEAD	404..532	CDD:350174	88/127 (69%)
sacy-1	NP_491962.1	SrmB	190..570	CDD:440279	246/379 (65%)