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Protein Alignment abs and Ddx5

DIOPT Version :10

Sequence 1:	NP_524220.1	Gene:	abs / 40530	FlyBaseID:	FBgn0015331	Length:	619	Species:	Drosophila melanogaster
Sequence 2:	NP_031866.2	Gene:	Ddx5 / 13207	MGIID:	105037	Length:	615	Species:	Mus musculus

Alignment Length:	450	Identity:	161/450 - (35%)
Similarity:	246/450 - (54%)	Gaps:	30/450 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   135 EQPIKTAW---KPPRYIREMSEE----------EREAVRHELRILVEGETPSPPIRSFREMKFPK 186
            |:.:|..|   :.|::.:...:|          |.:..|....|.|.|.....|:.:|.|..||.
Mouse    39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPA 103

  Fly   187 GILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPF-ER 250
            .:::.:|.:....||.||.||.|..|:|.|::|:|.|||||||.::||.|:....|    || ||
Mouse   104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLER 164

  Fly   251 NEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVA 315
            .:||..|::.|:||||:|..::...|.:   ||   .::|....||.|....:..:.|||.|.:|
Mouse   165 GDGPICLVLAPTRELAQQVQQVAAEYCR---AC---RLKSTCIYGGAPKGPQIRDLERGVEICIA 223

  Fly   316 TPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQN 380
            |||||:|.|:.....|....||.:||||||:|||||..:|.|....:..||||::|||.||:::.
Mouse   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 288

  Fly   381 FARSALVKPVTINVGRAG-AASMNVTQQVEY---VKQEAKVVYLL-DCLQKTAPPVLIFAEKKQD 440
            .|...|...:.||:|... :|:.|:.|.|:.   |:::.|::.|: :.:.:.....::|.|.|:.
Mouse   289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRR 353

  Fly   441 VDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDM 505
            .|.:...:...|..|:.|||.|.|:||...::.::.||..:|:||||||:|||..:|:.|||||.
Mouse   354 CDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDY 418

  Fly   506 PDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPE 565
            |:..|:|:||||||.||...|.|.|.......:.| .||..:|.|..|.:...|.:|..:
Mouse   419 PNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQV-SDLISVLREANQAINPKLLQLVED 477

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.