Sequence 1: | NP_000419.1 | Gene: | LTBP2 / 4053 | HGNCID: | 6715 | Length: | 1821 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022674.1 | Gene: | mua-3 / 176430 | WormBaseID: | WBGene00003482 | Length: | 3767 | Species: | Caenorhabditis elegans |
Alignment Length: | 2336 | Identity: | 477/2336 - (20%) |
---|---|---|---|
Similarity: | 701/2336 - (30%) | Gaps: | 879/2336 - (37%) |
- Green bases have known domain annotations that are detailed below.
Human 87 RAQPGWG-SPRRPTEAEARRPSRAQQSRRVQPPAQTR-RSTPLGQQQPAPRTRAAPALPRLGTPQ 149
Human 150 RSGAAPPTPPRGRLTGRNVCGGQCCPGWTTANSTNHCIKPVCEPPCQNRGSCSRPQLCV-CRSGF 213
Human 214 RGARCEEVIPDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 278
Human 279 LSGLSQTHPSQQHV--------------GLS-----RTVRLHPTA-----TASSQLSSNALPPGP 319
Human 320 GLEQRDGTQQAVPLEHPSSPWGLNLTEKIKKIKIVFTPTICKQTCARGHCANSCERGDTTTLYSQ 384
Human 385 GGHGHDPKSGFRIYFCQIPCLNGGRCI-GRDECWCPA-NSTGK--FC------HLPIPQP---DR 436
Human 437 EP-----PGR-GSRPRALLEAPLKQSTFTL-----PLSNQLASVNPSLVKVHIHHPPE------- 483
Human 484 ---ASVQIHQVAQVRGGVEE-ALVENSVETRP----PPWLPASPGHSLWDSNNIPAR-------- 532
Human 533 SGEPPRPLPPAAPRPRGLLGRCYLNTVNG---QCANPLLELTTQEDCCGSVGAFWGVTLCAPCPP 594
Human 595 RPASPVIENGQLECPQGYKRLNLTHCQDINECLTLGLCKDAECVNTRGSYLCTCRPGLMLDPSRS 659
Human 660 RCVSDKAISMLQGLCYRSLGPG-TCTLPLAQRITKQICCCSRVGKAWGSECEKCPLPGTEAFREI 723
Human 724 CPAGH--GYTYASSDIRLSMRKAEEEELARPPR------------------EQGQRSSGALPGPA 768
Human 769 ERQPLRVVTDTWL------------EAGTIPDKGDSQAGQVTTSVTHAPAWVTGNATTP------ 815
Human 816 ---------------------------------------PMPEQGIAEIQEEQVTPSTDVLVTLS 841
Human 842 TPGIDR----------------CAAG-----ATNVCG--------------PGTCVNLP-DGYRC 870
Human 871 VCSPGYQLHPSQAYCTDDNECLRDP------------CKGKGRCINRVGSYSCFCYPGYTLATSG 923
Human 924 ATQECQDINECEQPGVCSGG-----------QCTNTEGSYHCECDQGYIMVRKGHCQDINECRHP 977
Human 978 GT-------CPDG--------RCVNSPGSYTCLACEEGYRGQSGS--------CVDV-NECLT-- 1016
Human 1017 ----------------------------------PG-VCAH--GKCTN---------------LE 1029
Human 1030 GSFRCSCEQGYEVTSDEKG-----CQDV---DECAS-------------------RASCPTG--- 1064
Human 1065 ---------------------------------LCLNTEGSFACSACENGYW------VNEDGTA 1090
Human 1091 CEDL--------DECAFPGVCPSGVCTNTAGSFSCKDCDGGY---------RPSPLGDSCED-VD 1137
Human 1138 ECEDPQSSCL-GGECKNTVGSYQCLCPQG-FQLANGTVCED-------VNECMGEEH-CAPHGEC 1192
Human 1193 LNSHGSFFCLCAPGFV------SAEGGTSCQD--VDECAT--TDPCVGGHCVNTEGSFNCLCETG 1247
Human 1248 F-----------------QPSPESGECVDID---ECEDYGDPVC----GTWKCENSPGSYRCVLG 1288
Human 1289 CQPGFHMAPNGDCIDIDEC----ANDTMCGSHGFCDNTDGSFRCLCDQGFEISPSGWDCVD---- 1345
Human 1346 -------VNECEL-MLAVCGA-ALCENVEGSFLCLCASDLEEYDAQEGHCRPRGAGGQSMSEA-- 1399
Human 1400 PTGDHAPAPTRMDCYSGQKGH-----------APCSSVLGRNTTQA--ECC------CTQGASWG 1445
Human 1446 DA-----CDLCP--SEDSAE-----------FSEICPSGKGYIPVEGAWTFGQTMYTDADECVIF 1492
Human 1493 GPGLCPNG---RCLN--TVPGYVCL-----CNPGFHYDASHKKCEDHD-----ECQD-------- 1534
Human 1535 LACENGECV--------NTEGSFHCFCSPPLTLDLSQQRCMNSTSSTEDLPD------------- 1578
Human 1579 HDIHMDICWKKVTNDVCSEPLRGHRTTYTECCCQDG-----EAWSQQCALCPP------------ 1626
Human 1627 --------------RSSEVYAQLCNVARIEAEREAGVHFRPG--------YEYGPGPDDLHYS-- 1667
Human 1668 ---IYGPDGAPFYNYLGPEDTVPEPA------------------------------FPNTAGHSA 1699
Human 1700 DRTPILESPLQPSELQPHYVASHPEPPAGFEGLQAEECG--ILNGCEN-GRCVRVREGYTCDCFE 1761
Human 1762 GFQLD----AAHMACVDVNECD--DLNGPAVLC-VHGYCENTEGSYRCHCSPGYVAEAGPP 1815 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LTBP2 | NP_000419.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 38..58 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 81..165 | 15/79 (19%) | |||
Heparin-binding | 94..115 | 3/20 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 229..339 | 21/133 (16%) | |||
Heparin-binding | 232..249 | 1/16 (6%) | |||
Heparin-binding | 344..354 | 3/9 (33%) | |||
Cell attachment site. /evidence=ECO:0000255 | 375..377 | 0/1 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 510..544 | 7/45 (16%) | |||
EGF_CA | 622..>651 | CDD:214542 | 9/28 (32%) | ||
TB | 683..719 | CDD:279073 | 5/35 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 744..772 | 9/45 (20%) | |||
EGF_CA | 887..918 | CDD:214542 | 10/42 (24%) | ||
EGF_CA | 930..>960 | CDD:214542 | 9/40 (23%) | ||
EGF_CA | 970..1005 | CDD:238011 | 16/49 (33%) | ||
EGF_CA | 1010..1041 | CDD:214542 | 16/85 (19%) | ||
EGF_CA | 1051..1091 | CDD:284955 | 11/103 (11%) | ||
EGF_CA | 1093..1133 | CDD:284955 | 15/56 (27%) | ||
EGF_CA | 1135..1175 | CDD:214542 | 15/42 (36%) | ||
EGF_CA | 1176..1217 | CDD:214542 | 14/54 (26%) | ||
EGF_CA | 1218..1257 | CDD:284955 | 13/59 (22%) | ||
EGF_CA | 1303..1335 | CDD:238011 | 10/35 (29%) | ||
TB | 1423..1458 | CDD:279073 | 13/49 (27%) | ||
EGF_CA | 1485..1518 | CDD:214542 | 12/42 (29%) | ||
TB | 1595..1630 | CDD:279073 | 12/65 (18%) | ||
C-terminal domain. /evidence=ECO:0000269|PubMed:17293099 | 1639..1821 | 51/230 (22%) | |||
EGF_CA | 1774..>1808 | CDD:214542 | 13/36 (36%) | ||
mua-3 | NP_001022674.1 | LDLa | 32..60 | CDD:238060 | |
LDLa | 131..164 | CDD:238060 | |||
EGF_3 | 766..795 | CDD:289699 | 9/37 (24%) | ||
vWA_collagen_alphaI-XII-like | 1229..1398 | CDD:238759 | 25/169 (15%) | ||
EGF_3 | 1662..1691 | CDD:289699 | 2/28 (7%) | ||
EGF_CA | 1709..1755 | CDD:214542 | 12/47 (26%) | ||
EGF_CA | 1964..1997 | CDD:214542 | 11/32 (34%) | ||
SEA | 2873..2998 | CDD:214554 | |||
SEA | 3049..3173 | CDD:214554 | |||
EGF_CA | 3328..3364 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4721at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |