Sequence 1: | NP_000419.1 | Gene: | LTBP2 / 4053 | HGNCID: | 6715 | Length: | 1821 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001090757.1 | Gene: | notch1 / 100037842 | XenbaseID: | XB-GENE-479318 | Length: | 2522 | Species: | Xenopus tropicalis |
Alignment Length: | 1635 | Identity: | 392/1635 - (23%) |
---|---|---|---|
Similarity: | 562/1635 - (34%) | Gaps: | 629/1635 - (38%) |
- Green bases have known domain annotations that are detailed below.
Human 404 CLNGGRCI----GRDECWCPANSTGKFCHLPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSN 464
Human 465 QLASVNPSLVKVHIHHPPEASVQIHQVAQVRGGVEEALVENSVETRPPPWLPASPGHSLWDSNNI 529
Human 530 PARSGEPPRPLPPAAPRPRGLLGRCYLNTVNGQCAN---------PLLELTTQEDCCGSVGAFWG 585
Human 586 VTLCAPCPPRPASPVIENGQ---------LECPQGYKRLNLTHCQDINECLTLGLCKD-AECVNT 640
Human 641 RGSYLCTCRPGLMLDPSRSRCVSDKAISMLQGLCYRSLGPGTCTLPLAQRITKQICCCSRVGKAW 705
Human 706 GSECEKCPLPGTEAFREICPAGHGYTYASSDIRLSMRKAEEEELARPPREQGQRSSGALPGPAER 770
Human 771 QPLRVVTDTWLEAGTIPDKGDSQAGQVTTSVTHAPAWVTGNATTPPMPEQGIAEIQEEQVTPSTD 835
Human 836 VLVTLSTPGIDRCAAGATNVCGPGTCVNLPDGYRCVCSPGYQLHPSQAYCTDD-NEC--LRDPCK 897
Human 898 GKGRCINRVGSYSCFCYPGYTLATSGATQEC-QDINECEQPGVCSGGQCTNTEGSYHCECDQGYI 961
Human 962 MVRKG-HCQDINEC-RHPGTCPDG-RCVNSP--GSYTCLACEEGYRGQSGSC-VDVNEC-LTPGV 1019
Human 1020 CAH-GKCTNLEGSFRCSCEQGYEVTSDEKGCQ-DVDECASRASCPTGLCLNTEGSFACSACENGY 1082
Human 1083 WVNEDGTACE-DLDECA----------------FPGVCPSGV----------------CTNTA-- 1112
Human 1113 ----GSFSCKDCDGGYRPSPLGDSCE-DVDEC-EDPQSSCLGGECKNTVGSYQCLCPQGFQLANG 1171
Human 1172 TVCE-DVNECMGEEHCAPHGECLNSHGSFFCLCAPGFVSAEGGTSCQ-DVDECATTDPCVGGHCV 1234
Human 1235 NTEGSFNCLCETGFQPSPESGE-C-VDIDECEDYGDPVCGTWKCENSPGSYRCVLGCQPGFHMAP 1297
Human 1298 NGDCI-DIDECANDTMCGSHGFCDNTDGSFRCLCDQGFEISPSGWDC-VDVNECELMLAVCGAAL 1360
Human 1361 CENVEGSFLCLCASDLEEYDAQ-------EGHCRPRGAGGQSMSEAPTGDHAPAPTRMDCYSGQK 1418
Human 1419 GH-------APCSSVLGRNTTQAECC---CTQGASWGDACDLCPSEDSAEFSEICPSGKGYIPVE 1473
Human 1474 GAWTFGQTMYTDADECVIFGPGLCPNG-RCLNTVPGYVCLCNPGF---HYDASHKKC-------- 1526
Human 1527 ------------------------EDHDECQDLACENG----ECVNTEGSFHCFCSPPL------ 1557
Human 1558 --TLDLSQQRCMN--------STSS-------TEDLPDHDIHMDICWKK--VTNDVCSEPLRGHR 1603
Human 1604 TT----YTECCCQD-------------GEAWS----QQCALCPPRSSEVYAQLCNVARIEAEREA 1647
Human 1648 GV------------------HF---RPGY----------EYGPGPDDLHYSIYGPDGAPFYNYLG 1681
Human 1682 PEDTVPEPAFPNTAGHSADRTPILESPLQPSELQPHYVASHPEPPAGFEGL----QAEECGILNG 1742
Human 1743 CEN-GRCVRVREGYTCDCFEGFQLDAAHMAC-VDVNECDDLNGPAVL---CV-HGYCENTEGSYR 1801
Human 1802 CHCSPGYVAE 1811 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LTBP2 | NP_000419.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 38..58 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 81..165 | ||||
Heparin-binding | 94..115 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 229..339 | ||||
Heparin-binding | 232..249 | ||||
Heparin-binding | 344..354 | ||||
Cell attachment site. /evidence=ECO:0000255 | 375..377 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 510..544 | 0/33 (0%) | |||
EGF_CA | 622..>651 | CDD:214542 | 13/29 (45%) | ||
TB | 683..719 | CDD:279073 | 6/35 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 744..772 | 0/27 (0%) | |||
EGF_CA | 887..918 | CDD:214542 | 12/33 (36%) | ||
EGF_CA | 930..>960 | CDD:214542 | 9/29 (31%) | ||
EGF_CA | 970..1005 | CDD:238011 | 13/38 (34%) | ||
EGF_CA | 1010..1041 | CDD:214542 | 18/32 (56%) | ||
EGF_CA | 1051..1091 | CDD:284955 | 14/39 (36%) | ||
EGF_CA | 1093..1133 | CDD:284955 | 16/77 (21%) | ||
EGF_CA | 1135..1175 | CDD:214542 | 14/40 (35%) | ||
EGF_CA | 1176..1217 | CDD:214542 | 11/40 (28%) | ||
EGF_CA | 1218..1257 | CDD:284955 | 12/39 (31%) | ||
EGF_CA | 1303..1335 | CDD:238011 | 11/31 (35%) | ||
TB | 1423..1458 | CDD:279073 | 10/37 (27%) | ||
EGF_CA | 1485..1518 | CDD:214542 | 15/36 (42%) | ||
TB | 1595..1630 | CDD:279073 | 10/55 (18%) | ||
C-terminal domain. /evidence=ECO:0000269|PubMed:17293099 | 1639..1821 | 48/214 (22%) | |||
EGF_CA | 1774..>1808 | CDD:214542 | 11/37 (30%) | ||
notch1 | NP_001090757.1 | EGF_CA | 108..140 | CDD:238011 | 6/33 (18%) |
EGF | 145..175 | CDD:278437 | 5/31 (16%) | ||
EGF_CA | 179..215 | CDD:238011 | 16/88 (18%) | ||
EGF_CA | 223..254 | CDD:238011 | 11/108 (10%) | ||
EGF_CA | 256..292 | CDD:238011 | 13/41 (32%) | ||
EGF_CA | 294..331 | CDD:238011 | 13/42 (31%) | ||
EGF_CA | 334..369 | CDD:238011 | 12/38 (32%) | ||
EGF_CA | 411..449 | CDD:238011 | 19/41 (46%) | ||
EGF_CA | 451..487 | CDD:238011 | 14/40 (35%) | ||
EGF_CA | 489..525 | CDD:238011 | 8/35 (23%) | ||
EGF_CA | 528..563 | CDD:238011 | 8/39 (21%) | ||
EGF_CA | 565..599 | CDD:238011 | 14/39 (36%) | ||
EGF_CA | 602..638 | CDD:238011 | 11/40 (28%) | ||
EGF_CA | 640..674 | CDD:238011 | 12/39 (31%) | ||
EGF_CA | 677..712 | CDD:238011 | 11/41 (27%) | ||
EGF_CA | 716..749 | CDD:238011 | 13/38 (34%) | ||
EGF_CA | 754..788 | CDD:238011 | 9/34 (26%) | ||
EGF_CA | 790..826 | CDD:238011 | 8/53 (15%) | ||
EGF_CA | 833..866 | CDD:238011 | 14/48 (29%) | ||
Plasmod_Pvs28 | 837..1005 | CDD:283826 | 50/189 (26%) | ||
EGF_CA | 868..904 | CDD:238011 | 16/38 (42%) | ||
EGF_CA | 906..942 | CDD:238011 | 1/35 (3%) | ||
EGF_CA | 944..980 | CDD:238011 | 13/38 (34%) | ||
EGF_CA | 987..1018 | CDD:238011 | 6/30 (20%) | ||
EGF_CA | 1020..1056 | CDD:238011 | 8/37 (22%) | ||
EGF_CA | 1145..1179 | CDD:238011 | 14/79 (18%) | ||
EGF_CA | 1183..1218 | CDD:238011 | 12/39 (31%) | ||
EGF_CA | <1237..1264 | CDD:238011 | 11/25 (44%) | ||
EGF_CA | 1266..1303 | CDD:238011 | |||
EGF_CA | <1314..1345 | CDD:238011 | |||
NL | 1440..1477 | CDD:197463 | |||
LNR 1 | 1447..1487 | ||||
Notch | 1485..1520 | CDD:278494 | |||
LNR 2 | 1488..1529 | ||||
Notch | 1525..1560 | CDD:278494 | |||
LNR 3 | 1530..1564 | ||||
NOD | 1564..1615 | CDD:284282 | |||
NODP | 1666..1728 | CDD:284987 | |||
ANKYR | <1870..1980 | CDD:223738 | |||
ANK | <1870..1979 | CDD:238125 | |||
ANK repeat | 1877..1923 | CDD:293786 | |||
ANK 1 | 1877..1920 | ||||
ANK repeat | 1925..1956 | CDD:293786 | |||
ANK 2 | 1925..1954 | ||||
Ank_5 | 1945..2000 | CDD:290568 | |||
ANK | 1953..2079 | CDD:238125 | |||
ANK repeat | 1958..1990 | CDD:293786 | |||
ANK 3 | 1958..1988 | ||||
ANK repeat | 1992..2023 | CDD:293786 | |||
ANK 4 | 1992..2021 | ||||
Ank_2 | 1997..2089 | CDD:289560 | |||
ANK repeat | 2025..2089 | CDD:293786 | |||
ANK 5 | 2025..2054 | ||||
ANK 6 | 2058..2087 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2146..2229 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2365..2404 | ||||
DUF3454 | 2446..2507 | CDD:288764 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2449..2522 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |