DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and MRN1

DIOPT Version :10

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_015140.1 Gene:MRN1 / 855917 SGDID:S000006105 Length:612 Species:Saccharomyces cerevisiae


Alignment Length:203 Identity:45/203 - (22%)
Similarity:79/203 - (38%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SFWVKGECKRGEECPYRHDKPNEPDDPLCEQNIKDRYYGRNDPVAEKIMKRAASLPTLEPP---- 226
            :|.:..|........|.:::.:....|..::|..    ..:|.::..||..|.::.....|    
Yeast   126 NFEIDNEVVHNNNRYYEYERSSNEVSPFDDENPN----VLSDGMSPTIMATATAVTNANAPLPVN 186

  Fly   227 ----EDRNIT-----TLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAEL 282
                ...|.|     |:|:||:|..::..||.|. .:.|.:..:.::|.:.||||.:...:||.|
Yeast   187 AQANNPLNFTSAPSRTVYLGNVPPNLSVKELLDH-VRSGVVEDVKIIPEKMCAFVSFIDESAALL 250

  Fly   283 -AAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTDRRFDLAGIPPPSAKPNDYF----------N 336
             .::....:|.|..|.:.|.|       |...:.| ....|.|....|..|.|.          :
Yeast   251 FHSDAILKRLNIGDRDIKIGW-------GKPTRID-PIVAARISTDGATRNVYIGRMTIEGEESH 307

  Fly   337 LRQEQINV 344
            |.:||:.|
Yeast   308 LSEEQLRV 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 3/18 (17%)
RRM_RBM22 231..304 CDD:409671 23/78 (29%)
PABP-1234 <234..>377 CDD:130689 32/122 (26%)
MRN1NP_015140.1 RRM1_MRN1 200..273 CDD:240964 22/80 (28%)
RRM2_MRN1 289..372 CDD:409943 7/27 (26%)
RRM3_MRN1 430..503 CDD:240965
RRM_SF 519..606 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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