Protein Alignment CG14641 and NAB6

DIOPT Version :9

• Sequence 1: NP_649440.3
• Gene: CG14641 / 40529
• FlyBaseID: FBgn0037220
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_013589.1
• Gene: NAB6 / 854922
• SGDID: S000004585
• Length: 1134
• Species: Saccharomyces cerevisiae
• Alignment Length: 337
• Identity: 63/337 - (18%)
• Similarity: 110/337 - (32%)
• Gaps: 108/337 - (32%)

  Fly    69 EICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVAD---------NMPQSDVNKEYYIQNIDAQ 124
            ||.....:|:.|    .||..| |.|..||......:         .:.::..|...:.|:|.:.
Yeast   523 EIDMLATKLQGV----ELDGTY-LEINYRDYQTPTIEEHSTHLSNVKISKTTENSRQFSQDIPSP 582

  Fly   125 LQ------DGDGTEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRH 183
            |.      ..|..::.||:    ...::::..:..:|..:.|:..:
Yeast   583 LPLNEHMFMNDSNQSNGAI----IPQQLIATPSPVSPNLQMNQRVL------------------- 624

  Fly   184 DKPNEPDDPLCEQNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNL-----PEEI 243
              || |.....|||..         |:.|:.....|        |....|:|:||:     .|:|
Yeast   625 --PN-PITQSLEQNFN---------VSAKVASSMGS--------DIGNRTIYIGNINPRSKAEDI 669

  Fly   244 TEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKR-NAAELAAERTFNKLVIQGRKVSIKWAHSQA 307
            .      ...:.|.::||..:|.::..||.:.:. :|.:..|....:.:|:.|..:.:.|.|...
Yeast   670 C------NVVRGGILQSIKYIPEKKICFVTFIEAPSAVQFYANSFIDPIVLHGNMLRVGWGHYSG 728

  Fly   308 KQGTAAKTDRRFDLAGIPPP---------SAKPNDYFNLRQ----EQINVMPAGMKLHQ---LPS 356
                             |.|         .|..|.|.:|.:    |:....|...|||:   ||.
Yeast   729 -----------------PLPKLISLAVTIGASRNVYVSLPEFAFKEKFIHDPQYKKLHETLSLPD 776

  Fly   357 NLVPASAYQMYG 368
            .......:..||
Yeast   777 AEQLREDFSTYG 788

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG14641	NP_649440.3	ZnF_C3H1	159..185	CDD:214632	1/25 (4%)
		RRM	186..>309	CDD:223796	28/128 (22%)
		RRM_RBM22	231..304	CDD:240670	17/78 (22%)
NAB6	NP_013589.1	RRM	60..104	CDD:287364
		Nab6_mRNP_bdg	199..560	CDD:287529	11/41 (27%)
		RRM3_MRN1	652..725	CDD:240965	17/78 (22%)
		RRM_SF	741..860	CDD:302621	13/48 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR14089
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100