DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and Rbm22

DIOPT Version :10

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_080052.1 Gene:Rbm22 / 66810 MGIID:1914060 Length:420 Species:Mus musculus


Alignment Length:435 Identity:250/435 - (57%)
Similarity:312/435 - (71%) Gaps:43/435 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRF 65
            |:.|..:|||||||||||:||||||||||:|||:||.||::|||||||.||||:||||||.||||
Mouse     1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRF 65

  Fly    66 KKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDGDG 130
            ||||:||||::|||||||||||||||||||||||.|...|:||:||||||||.||::.::.:.||
Mouse    66 KKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNSDG 130

  Fly   131 TEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCE 195
            |...|.:|::.:.::||.|||||.|||||||||||||||||||||||||||||:||.:|||||.:
Mouse   131 TRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLAD 195

  Fly   196 QNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRS 260
            |||||||||.|||||:|::|||:::|.|:||||:.|||||||.|.:.|||.:||:.||||||||:
Mouse   196 QNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRT 260

  Fly   261 IALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTDRRFDLAGI- 324
            |.:|.||||||:|:..|.|||:|||::||||::.||::::||..|||.:|...:.|...| :|| 
Mouse   261 ITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTD-SGIK 324

  Fly   325 ------------PPPSAKPN---DYFNLRQEQINVMPAGMKLHQLPSNLVPASAYQMYGQPTYAA 374
                        |||:|:..   :||||       .|:|           |.:...:...|    
Mouse   325 LEPVPGLPGALPPPPAAEEEASANYFNL-------PPSG-----------PPAVVNIALPP---- 367

  Fly   375 PYGNATSTALSSSGVNLDSISIPPP----PGQVPYPSQDASRMGA 415
            |.|.|..............:..|||    ||.:.|||||..||||
Mouse   368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM_RBM22 231..304 CDD:409671 45/72 (63%)
PABP-1234 <234..>377 CDD:130689 63/158 (40%)
Rbm22NP_080052.1 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM_RBM22 231..304 CDD:409671 45/72 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..343 12/40 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..420 15/41 (37%)

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