DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and Rbm22

DIOPT Version :9

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_080052.1 Gene:Rbm22 / 66810 MGIID:1914060 Length:420 Species:Mus musculus


Alignment Length:435 Identity:250/435 - (57%)
Similarity:312/435 - (71%) Gaps:43/435 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRF 65
            |:.|..:|||||||||||:||||||||||:|||:||.||::|||||||.||||:||||||.||||
Mouse     1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRF 65

  Fly    66 KKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDGDG 130
            ||||:||||::|||||||||||||||||||||||.|...|:||:||||||||.||::.::.:.||
Mouse    66 KKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNSDG 130

  Fly   131 TEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCE 195
            |...|.:|::.:.::||.|||||.|||||||||||||||||||||||||||||:||.:|||||.:
Mouse   131 TRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLAD 195

  Fly   196 QNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRS 260
            |||||||||.|||||:|::|||:::|.|:||||:.|||||||.|.:.|||.:||:.||||||||:
Mouse   196 QNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRT 260

  Fly   261 IALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTDRRFDLAGI- 324
            |.:|.||||||:|:..|.|||:|||::||||::.||::::||..|||.:|...:.|...| :|| 
Mouse   261 ITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTD-SGIK 324

  Fly   325 ------------PPPSAKPN---DYFNLRQEQINVMPAGMKLHQLPSNLVPASAYQMYGQPTYAA 374
                        |||:|:..   :||||       .|:|           |.:...:...|    
Mouse   325 LEPVPGLPGALPPPPAAEEEASANYFNL-------PPSG-----------PPAVVNIALPP---- 367

  Fly   375 PYGNATSTALSSSGVNLDSISIPPP----PGQVPYPSQDASRMGA 415
            |.|.|..............:..|||    ||.:.|||||..||||
Mouse   368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM 186..>309 CDD:223796 78/122 (64%)
RRM_RBM22 231..304 CDD:240670 45/72 (63%)
Rbm22NP_080052.1 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM_RBM22 231..304 CDD:409671 45/72 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..343 12/40 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..420 15/41 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833730
Domainoid 1 1.000 400 1.000 Domainoid score I738
eggNOG 1 0.900 - - E1_KOG0153
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69245
Inparanoid 1 1.050 514 1.000 Inparanoid score I1288
Isobase 1 0.950 - 0 Normalized mean entropy S1481
OMA 1 1.010 - - QHG54734
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003246
OrthoInspector 1 1.000 - - oto93089
orthoMCL 1 0.900 - - OOG6_102614
Panther 1 1.100 - - LDO PTHR14089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1348
SonicParanoid 1 1.000 - - X2658
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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