DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and rbm22

DIOPT Version :9

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_998379.1 Gene:rbm22 / 406495 ZFINID:ZDB-GENE-040426-2298 Length:425 Species:Danio rerio


Alignment Length:436 Identity:249/436 - (57%)
Similarity:311/436 - (71%) Gaps:40/436 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRF 65
            |:.|..:||||||||||::||||||||||:|||:||.||:||||||||.||||:||||||.||||
Zfish     1 MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRF 65

  Fly    66 KKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDGDG 130
            ||||:||||:::|||||||||||||||||||||..|.|.|.:|:||||||||.||::.::.:.||
Zfish    66 KKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQNMEREIANSDG 130

  Fly   131 TEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCE 195
            |...|.:|::.::::||.|||||.|||||||||||||||||||||||||||||:||.:|||||.:
Zfish   131 TRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLAD 195

  Fly   196 QNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRS 260
            |||||||||.|||||.|::.||:::|.|:.|:|::|||||:|.|.|.:|:.|||:.||||||||:
Zfish   196 QNIKDRYYGINDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFYQFGEIRT 260

  Fly   261 IALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAK---TDRRFDL- 321
            |.:|.||||||:|:..|.|||.|||::||||:|.||::::||..|||.:|...|   |:....| 
Zfish   261 ITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNVKWGRSQAARGKGEKDGVTESGIRLE 325

  Fly   322 ------AGIPPPSAKPND----YFNLRQEQINVMPAGMKLHQLPSNLVPASAYQMYGQPTYAAPY 376
                  ..:|||.....|    ||||..   ...||.|.|     .|.|.....|...|.:..|.
Zfish   326 PVPGLPGALPPPPVSDEDASTNYFNLAP---TPSPAVMNL-----GLPPPPGVTMPPPPGFGPPM 382

  Fly   377 GNATSTALSSSGVNLDSIS--IPP-----PPGQVPYPSQDASRMGA 415
            .:           .:|.::  :||     |||||.|||||..||||
Zfish   383 FH-----------TMDPMAPPVPPPMALRPPGQVHYPSQDPQRMGA 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM 186..>309 CDD:223796 75/122 (61%)
RRM_RBM22 231..304 CDD:240670 45/72 (63%)
rbm22NP_998379.1 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM 186..>307 CDD:223796 73/120 (61%)
RRM_RBM22 231..304 CDD:240670 45/72 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..331 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..425 17/45 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576453
Domainoid 1 1.000 388 1.000 Domainoid score I758
eggNOG 1 0.900 - - E1_KOG0153
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69245
Inparanoid 1 1.050 513 1.000 Inparanoid score I1269
OMA 1 1.010 - - QHG54734
OrthoDB 1 1.010 - - D1272857at2759
OrthoFinder 1 1.000 - - FOG0003246
OrthoInspector 1 1.000 - - oto40537
orthoMCL 1 0.900 - - OOG6_102614
Panther 1 1.100 - - LDO PTHR14089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1348
SonicParanoid 1 1.000 - - X2658
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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