DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and rbm22

DIOPT Version :9

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_989108.1 Gene:rbm22 / 394713 XenbaseID:XB-GENE-971198 Length:417 Species:Xenopus tropicalis


Alignment Length:455 Identity:248/455 - (54%)
Similarity:310/455 - (68%) Gaps:86/455 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRF 65
            |:.|..:|||||||||||:||||||||||:|||:||.||::|||||||.||||:||||||.||||
 Frog     1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRF 65

  Fly    66 KKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDGDG 130
            ||||:||||::|||||||||||||||||||||||...:.|.||:||||||||.||::.::.:.||
 Frog    66 KKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANSDG 130

  Fly   131 TEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCE 195
            |...||:|::.::::||.|||||.|||||||||||||||||||||||||||||:||.:|||||.:
 Frog   131 TRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLAD 195

  Fly   196 QNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRS 260
            |||||||||.|||||:|::|||:::|.|:||||::|||||||.|.:.|:|.|||:.||||||||:
 Frog   196 QNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRT 260

  Fly   261 IALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTDRRFD----- 320
            |.:|.||||||:|:..|.|||:|||::||||::.||::::||..|||.:|...:.|...|     
 Frog   261 ITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKL 325

  Fly   321 -----LAG-IPPPSAKPN---DYFNLRQEQINVMPAGMKLHQLPSNLVPASAYQMYGQPTYAAPY 376
                 |.| :|||..:..   :||||                                    .|.
 Frog   326 EPVPGLPGALPPPPTEEESSANYFNL------------------------------------PPN 354

  Fly   377 GNATSTALSSSGVNLDSISIPPP--------------------------PGQVPYPSQDASRMGA 415
            |:|.          |.:||:|||                          ||.:.|||||..||||
 Frog   355 GSAA----------LVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGA 409

  Fly   416  415
             Frog   410  409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM 186..>309 CDD:223796 78/122 (64%)
RRM_RBM22 231..304 CDD:240670 45/72 (63%)
rbm22NP_989108.1 ZnF_C3H1 159..185 CDD:214632 25/25 (100%)
RRM_RBM22 231..304 CDD:240670 45/72 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..417 35/153 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 401 1.000 Domainoid score I725
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69245
Inparanoid 1 1.050 515 1.000 Inparanoid score I1267
OMA 1 1.010 - - QHG54734
OrthoDB 1 1.010 - - D1272857at2759
OrthoFinder 1 1.000 - - FOG0003246
OrthoInspector 1 1.000 - - oto103342
Panther 1 1.100 - - LDO PTHR14089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1348
SonicParanoid 1 1.000 - - X2658
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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