DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14641 and cwf5

DIOPT Version :10

Sequence 1:NP_649440.3 Gene:CG14641 / 40529 FlyBaseID:FBgn0037220 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_588094.1 Gene:cwf5 / 2538974 PomBaseID:SPCC550.02C Length:354 Species:Schizosaccharomyces pombe


Alignment Length:414 Identity:131/414 - (31%)
Similarity:202/414 - (48%) Gaps:88/414 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRFKKTEICQTCA 75
            |:|.|||.|||.:|:.|||||.||||.||..|:|||||::|.|||||......:..||:||..||
pombe    10 NKQEWEDVEFPSICERCLGDNSYVRMTKEPLGQECKICSKPCTIFRWIKERGQKPGKTQICVGCA 74

  Fly    76 RLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDG----DGTEAAGA 136
            |.||.||:|:|||::||||.:||||||:.::.|.:|:|:|::.||....|.:|    |..||   
pombe    75 RYKNCCQSCMLDLQFGLPIALRDAALKLVESGPTNDINREFFAQNQQRLLSNGETAYDSQEA--- 136

  Fly   137 VGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCEQNIKDR 201
               |.||..::.|:.:...:   :||                 |.|.....|....|.|....|.
pombe   137 ---SAAARNLVKKVEKRELH---SRP-----------------PKRKLDDVESKQILKEARASDA 178

  Fly   202 YYGRNDPV--AEKIMKRAASLP-TLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIAL 263
            ......|:  .:||:....||. .:|||:|:.|.:|::..:.:|:.:.::|..|.|:|.::|:..
pombe   179 SLNAERPLFPVKKIINGNVSLSINMEPPKDKKIASLFLIGVEDELADYKIRKHFEQYGPLKSVVC 243

  Fly   264 VPRQQCAFVQYTKRNAAELAAERT-FNKLVIQGRKVSIKWAHSQAKQGTAAKTDRRFDLAGIPPP 327
            ..|.:||||.:..|::||:||..: ...:||:|.::.::|...::..|                 
pombe   244 SHRAKCAFVNFKTRSSAEIAAAASPDGNVVIEGFRLKVQWGKPRSLGG----------------- 291

  Fly   328 SAKPNDYFNLRQEQINVMPAGMKLHQLPSNLVPASAYQMYGQPTYAAPYGNATSTALSSSGV-NL 391
                              |.|...:...::||      |.|     :.:||.||...:...: |.
pombe   292 ------------------PEGEVRNAKLADLV------MRG-----SSHGNKTSQKSTIKNIENE 327

  Fly   392 D-------SISIPPPPGQVPYPSQ 408
            |       :::||..|.|..|.||
pombe   328 DHENTKSPAVAIPIDPNQPRYRSQ 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14641NP_649440.3 ZnF_C3H1 159..185 CDD:214632 4/25 (16%)
RRM_RBM22 231..304 CDD:409671 22/73 (30%)
PABP-1234 <234..>377 CDD:130689 28/143 (20%)
cwf5NP_588094.1 RRM_SLT11 210..285 CDD:409709 22/74 (30%)

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