DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta-Man and manba

DIOPT Version :10

Sequence 1:NP_649436.2 Gene:beta-Man / 40524 FlyBaseID:FBgn0037215 Length:908 Species:Drosophila melanogaster
Sequence 2:XP_002934804.3 Gene:manba / 100485931 XenbaseID:XB-GENE-985698 Length:885 Species:Xenopus tropicalis


Alignment Length:902 Identity:312/902 - (34%)
Similarity:467/902 - (51%) Gaps:120/902 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DKVEVIELS-NWTITNQNGSLTIANQTLPLGIYSAFAPQVL--DSY---NDVGLRYLAYDNFTFS 90
            |:.:...|: .|.|.|.:||..:..: :|..:::|.|.|:|  |.|   ||...:::|.|.:.:|
 Frog    27 DRSQTFSLNGRWDIRNSHGSYKLKGE-VPGCVHTALAEQLLIEDPYVRFNDAVYKWIAQDEWIYS 90

  Fly    91 NFFQ--FDVHHFNRGHINLTFHGIDTVSEIRLNHQLLGRTDNMFVRYSYEVSSLLQAENFLEVEI 153
            ..|.  .|:..:.:  :.|.|.||||||.|.||:..:.:|.|||.||:.:|:.::..:|.:||:.
 Frog    91 RTFSLPLDIRLWQK--VILVFEGIDTVSTILLNNISVAKTYNMFTRYTVDVTKIVAKDNNIEVQF 153

  Fly   154 QSPVVAALARANALKEAKKSVPPECPNERYHGECHMNMLRKMQASFSWDWGPAAPSAGIWKNVEL 218
            ||.|..|..|:.   .:...|||:||.:...||||:|.:||.|.||||||||:.|:.||||.|.:
 Frog   154 QSAVNWAKDRSG---NSTYKVPPDCPPQVQKGECHVNFIRKSQCSFSWDWGPSFPTQGIWKEVRI 215

  Fly   219 EIYE---------VAVIREVDVDVSRVNGSYWNMHIRCFLDAGGWQNFNGRL---VLYAVELLDR 271
            |.|.         |.|..::         |.|.:......|.    ..||.|   |...:..|:.
 Frog   216 EAYNAFHLDYLSFVPVFDKI---------SQWTVMFESVFDV----ITNGPLPGNVTVKIPDLNV 267

  Fly   272 PVVVDRYAIKNISHLAPVIEFDQAVPNGKVVTWWPNGYGEQKLYPLHFTLKTWLGPDGPEVRSKT 336
            ..:.....|.....|...::..:.:   :|..|||||||.|..|.|  |:| :|...|..|.:.|
 Frog   268 DEMQTFVLIPGQQELKMTVKISKKI---EVNLWWPNGYGSQNSYNL--TVK-FLFDGGYTVENTT 326

  Fly   337 KSHKSLRVGFRTLDLVEDPAPDGVGNTFLFRVNGVEMFMKGSNYIPSHLLPEMQTNEQISHLLRS 401
            |      :.||:::|||:|....:|.:|..::|.|.:|:||||:||:....:..|..::.:||:|
 Frog   327 K------IYFRSVELVEEPIQGSLGLSFYMKINQVPIFLKGSNWIPADSFQDKITLNRLHNLLQS 385

  Fly   402 AKEAHMNMLRVWGGGVYESDYFYQLADSLGLLIWQDMMFACAMYPVNDEFLSSVREEVRQNAMRL 466
            ..:|:||.|||||||:||||.||:|.|.||:::|||.|||||:||.:..||.:|..||.....||
 Frog   386 VVDANMNTLRVWGGGLYESDEFYRLCDELGIMVWQDFMFACALYPTDKWFLETVEAEVIHQMRRL 450

  Fly   467 SHHPSVAIFVTNNENEAALVQNWYGTLFER-DRFESEYRELYLANVIHELKLVSHSSRPQPLV-S 529
            ..|||:.::..|||||||:..||:....|: |.:..:|..||:..:   :.||......:|.: |
 Frog   451 RSHPSIIVWSGNNENEAAIADNWFSIPAEKEDVYRMDYVTLYIKTI---MPLVLKMDETRPFISS 512

  Fly   530 SPSNGKASEPDNYISSNPQDNQNGDVHFYDYTKDGWDPGIFPRPRFVSEFGFQSFPGAYA----- 589
            ||:|||.|..:.:::.||.||..||:|:|.|..|.||...:|:||..||:||||:|....     
 Frog   513 SPTNGKESVQEYWLAKNPYDNHYGDIHYYSYITDCWDWKSYPKPRLASEYGFQSWPSLSTLKKVS 577

  Fly   590 ----WQRSKGEDDDLLGLITHRQHHPLGNVPVIALVERHLPLPFPENEN------YATALIYFSQ 644
                |..:.       ...:|||||..||..:::..:.|  ...|||.:      |.   :|.:|
 Frog   578 VPVDWHYTS-------NFCSHRQHHSSGNEQMLSQAKLH--YKNPENNDPIKEFQYT---LYLTQ 630

  Fly   645 IAQAMATKVETELY-RSLRDTP---HRTMGALYWQLNDVWVAPSWSSIDFYGNWKLLHYWARDFL 705
            :.||...|::||.| ||:|:..   ..|||||||||||:|.|||||||::.|.||:|||:|::|.
 Frog   631 VMQAQCVKLQTEFYRRSMREIVGGLGHTMGALYWQLNDIWQAPSWSSIEYGGKWKMLHYYAKNFF 695

  Fly   706 APISIVALYEKSTDSLNISLICD-------QLEVDPRELNVVANVHLWSQLLP-RQSTSWDVTLR 762
            .|::..|..:|  |.|.|..:.|       ||||         .|:.|:.||| .:..:.::...
 Frog   696 TPVAASAFEDK--DVLQIYGVSDLTKSLSLQLEV---------KVYRWNSLLPVCERLTEELIFN 749

  Fly   763 PNGVQYDKVIAISDLLQ--GEFTRTNAFLELQ-LRRGQDVISRTHFFPSSIAGAVGIEDPGLEFE 824
            .|..|..|. .|.:||:  ...||.|:.:... |.:||...|....:.:|:..|.|:..|.:...
 Frog   750 VNTSQIYKE-PIPELLRRCQNSTRENSVVVFSLLNQGQPYSSMNWHYLTSLKHAQGLLQPNITVS 813

  Fly   825 IASRTCLNTTNVVRNSVSISIQVKRPAVFVYLELLKPYRYTLSENGFMQTEPMHVVY 881
            |.........::|.:||         |.||:|::. ......|:|||:..|....||
 Frog   814 ITRENTGFAFHLVTSSV---------APFVWLDVW-DISGRFSDNGFLLAEKTKTVY 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-ManNP_649436.2 LacZ 95..>710 CDD:442481 245/647 (38%)
Mannosidase_ig 719..808 CDD:465505 26/99 (26%)
manbaXP_002934804.3 LacZ 53..>701 CDD:442481 258/692 (37%)
Mannosidase_ig 707..801 CDD:465505 27/103 (26%)
Ig_mannosidase 807..883 CDD:465483 16/64 (25%)

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