Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286298.1 | Gene: | CG12344 / 36145 | FlyBaseID: | FBgn0033558 | Length: | 449 | Species: | Drosophila melanogaster |
Alignment Length: | 314 | Identity: | 65/314 - (20%) |
---|---|---|---|
Similarity: | 129/314 - (41%) | Gaps: | 38/314 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 NYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR------WEPKEY 80
Fly 81 GGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLA---TKATIYSEGLVEWKPPAIYKSSCEIDVEY 142
Fly 143 FPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSNVVAVGVDLS------EFYMSVEWDILEVPAV 201
Fly 202 RNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDS-GEKVTLSISI 265
Fly 266 LISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISIC--VTVVVLNVHFR 317 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 65/314 (21%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 43/219 (20%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 22/87 (25%) | ||
CG12344 | NP_001286298.1 | LIC | 8..441 | CDD:273305 | 65/314 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |