Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
Alignment Length: | 770 | Identity: | 378/770 - (49%) |
---|---|---|---|
Similarity: | 433/770 - (56%) | Gaps: | 245/770 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 NPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKL 73
Fly 74 RWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEI 138
Fly 139 DVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSNVVAVGVDLSEFYMSVEWDILEVPAVRN 203
Fly 204 EKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILIS 268
Fly 269 LHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFI 333
Fly 334 DFLPAFLFIKRPTY----NFETSKLLLKDT-----------------------HA---------- 361
Fly 362 --------------C-----------------FYPYYSAT------NIDRLVSSGYNNSLPKED- 388
Fly 389 --LSQSIT-----------------------ANGPFGG--------------SCQVH-GPVPPLT 413
Fly 414 H-------------------------------------CSSDEIAAVPDMDIGPLGMKSPILNNP 441
Fly 442 AFSHSK----------------------------------------------------------- 447
Fly 448 ------------------C------------LPKIHKSCFCVRFIAEHTKMQEDSTKVKEDWKYV 482
Fly 483 AMVLDRLFLWIFTLAVVVGTAGIILQAPTLYDDRIPIIEQKDLDFSGTSAGRCRP 537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 361/736 (49%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 194/214 (91%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 156/511 (31%) | ||
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 194/214 (91%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 84/110 (76%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 39/76 (51%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45468864 | |
Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
11 | 10.800 |