Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506868.2 | Gene: | acr-18 / 191604 | WormBaseID: | WBGene00000057 | Length: | 510 | Species: | Caenorhabditis elegans |
Alignment Length: | 524 | Identity: | 140/524 - (26%) |
---|---|---|---|
Similarity: | 258/524 - (49%) | Gaps: | 70/524 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 KRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEP 77
Fly 78 KEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVT-LATKATIYSEGLVEWKPPAIYKSSCEIDVE 141
Fly 142 YFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSNVVAVGVDLSEFYM-SVEWDILEVPAVRNEK 205
Fly 206 FYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLP----SDSGEKVTLSISIL 266
Fly 267 ISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRV 331
Fly 332 FIDFLPAFLFIKRP----TYNFETSKLLLKDTH--ACFYPYYSATNIDRLVSSGYNNSLPKEDLS 390
Fly 391 QSITANGPFGGSCQVHGPVPPLTHCSSDEIAAVPDMDIGPLGMKSPILNNPAFSHSKCLPKIHKS 455
Fly 456 CFCVRFIAEHTK----MQEDSTKVKEDWKYVAMVLDRLFLWIFTLAVVVGTAGIILQA---PTLY 513
Fly 514 DDRI 517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 136/507 (27%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 76/215 (35%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 59/284 (21%) | ||
acr-18 | NP_506868.2 | Neur_chan_LBD | 33..237 | CDD:280998 | 76/213 (36%) |
Neur_chan_memb | 244..486 | CDD:280999 | 58/282 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |