Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_495716.1 | Gene: | acr-14 / 191601 | WormBaseID: | WBGene00000053 | Length: | 500 | Species: | Caenorhabditis elegans |
Alignment Length: | 530 | Identity: | 172/530 - (32%) |
---|---|---|---|
Similarity: | 283/530 - (53%) | Gaps: | 79/530 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VAGNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 70
Fly 71 YKLRWEPKEYGGVHMLHVPSD-----HIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPA 130
Fly 131 IYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHM---------------DEQQGSN---- 176
Fly 177 VVAVGVDLSEFYMSVEWDILEVPAVR-NEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 240
Fly 241 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISI 305
Fly 306 CVTVVVLNVHFRSPQTHKMAPWVKRVFIDFLPAFLFIKRPTYNFETSKLLLKDTHACFYPYYSAT 370
Fly 371 NIDRLVSSGYNNSLPKEDLSQSITANGPFGGSCQVHGPVPPLTHCSSDEIAA---VPDMDIGPLG 432
Fly 433 MKSPILNNPAFSHSKCLPKIHKSCFCVRFIAEHTKMQEDSTKVKEDWKYVAMVLDRLFLWIFTLA 497
Fly 498 VVVGTAGIIL 507 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 170/526 (32%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 84/239 (35%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 79/273 (29%) | ||
acr-14 | NP_495716.1 | LIC | 21..483 | CDD:273305 | 166/512 (32%) |
Neur_chan_LBD | 21..258 | CDD:280998 | 84/239 (35%) | ||
Neur_chan_memb | 265..491 | CDD:280999 | 79/273 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |