Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510285.2 | Gene: | acr-9 / 191597 | WormBaseID: | WBGene00000048 | Length: | 534 | Species: | Caenorhabditis elegans |
Alignment Length: | 551 | Identity: | 193/551 - (35%) |
---|---|---|---|
Similarity: | 295/551 - (53%) | Gaps: | 84/551 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VAGNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 70
Fly 71 YKLRWEPKEYGGVHMLHVP--SDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYK 133
Fly 134 SSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSNVVAVGVDLSEFYMSVEWDILEV 198
Fly 199 PAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSI 263
Fly 264 SILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWV 328
Fly 329 KRVFIDFLPAFLFIKRPTYNFETSKLLLKDTHACFYPYYSATNIDRLVSSG-YNNSL-------- 384
Fly 385 --PKEDLS----------QSITANGPFGGSCQVHGPVPPLTHCSSDEIAAVPDMDIGPLGMKSPI 437
Fly 438 LNNPAFSHSKCLPK--------------IHKSCFCVRFIAEHT-----KMQED--STKVKEDWKY 481
Fly 482 VAMVLDRLFLWIFTLAVVVGTAGIILQAPTL 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 189/542 (35%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 90/216 (42%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 93/312 (30%) | ||
acr-9 | NP_510285.2 | LIC | 28..525 | CDD:273305 | 187/536 (35%) |
Neur_chan_LBD | 28..242 | CDD:280998 | 90/216 (42%) | ||
Neur_chan_memb | 249..525 | CDD:280999 | 93/312 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |