Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005190.4 | Gene: | CHRNG / 1146 | HGNCID: | 1967 | Length: | 517 | Species: | Homo sapiens |
Alignment Length: | 545 | Identity: | 185/545 - (33%) |
---|---|---|---|
Similarity: | 277/545 - (50%) | Gaps: | 95/545 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 GNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYK 72
Fly 73 LRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCE 137
Fly 138 IDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSNVVAVGVDLSEFYMSVEWDILEVPAVR 202
Fly 203 NEKFYTCCDEPYLD------------ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDS 255
Fly 256 -GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSP 319
Fly 320 QTHKMAPWVKRVFIDFLPAFLFIK-RPTYNFETSKLLLKDTHACFYPYYSATNIDRLV--SSGYN 381
Fly 382 NS--------LPKEDL------SQSITANGPFGGSCQVHGPVPPLTHCSSDEIAAVPDMDIGP-L 431
Fly 432 GMKSPILNNPAFSHSKCLPKIHKSCFCVRFIAEHTKMQEDSTKVKEDWKYVAMVLDRL-FLWIFT 495
Fly 496 LAVVVGTAGIILQAPTLYDDRIPII 520 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 179/528 (34%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 86/226 (38%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 87/290 (30%) | ||
CHRNG | NP_005190.4 | LGIC_ECD_nAChR_G | 49..241 | CDD:349830 | 78/203 (38%) |
Neur_chan_memb | 248..492 | CDD:397193 | 88/291 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |