Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_067611.2 | Gene: | Chrnd / 11447 | MGIID: | 87893 | Length: | 520 | Species: | Mus musculus |
Alignment Length: | 512 | Identity: | 171/512 - (33%) |
---|---|---|---|
Similarity: | 277/512 - (54%) | Gaps: | 52/512 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 GNPDAKRLYDDLLS--NYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 70
Fly 71 YKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSS 135
Fly 136 CEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQGSN---VVAVGVDLSEFYMSVEWDILE 197
Fly 198 VPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTL 261
Fly 262 SISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAP 326
Fly 327 WVKRVFIDFLPAFLFIKRPTYNFETSKLLLKDTHACFY-----PYYSATNIDRLVSSGYNNSLPK 386
Fly 387 EDLSQSITANGPFGGSCQVHGPVPPLTHCSSDEIAAVPDMDIGPLGMKSPILNNPAFSHSKCLPK 451
Fly 452 IHKSCFCVRFIAEHTKMQEDSTKVKEDWKYVAMVLDRLFLWIFTLAVVVGTAGIILQ 508 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 168/507 (33%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 78/220 (35%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 84/275 (31%) | ||
Chrnd | NP_067611.2 | LIC | 1..479 | CDD:273305 | 162/495 (33%) |
Neur_chan_LBD | 28..249 | CDD:280998 | 78/220 (35%) | ||
Neur_chan_memb | 256..492 | CDD:280999 | 84/276 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |