Sequence 1: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016858745.1 | Gene: | CHRNA1 / 1134 | HGNCID: | 1955 | Length: | 489 | Species: | Homo sapiens |
Alignment Length: | 532 | Identity: | 206/532 - (38%) |
---|---|---|---|
Similarity: | 291/532 - (54%) | Gaps: | 107/532 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 GAVAGNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQ-- 66
Fly 67 -----------------------SWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNF 108
Fly 109 EVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQQ 173
Fly 174 GSNVVAVGVDLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIP 237
Fly 238 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 302
Fly 303 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIDFLPAFLF---IKRPTYNFETSKLLLKDTHACFY 364
Fly 365 PYYSATNIDRLVSSGYNNSLPKEDLSQSITANGPFGGSCQVHG-PVPPLTHCSSDEIAAVPDMDI 428
Fly 429 GPLGMKSPILNNPAFSHSKCLPKIHKSCFCVRFIAEHTKMQEDSTKVKEDWKYVAMVLDRLFLWI 493
Fly 494 FTLAVVVGTAGI 505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 206/530 (39%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 101/240 (42%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 99/274 (36%) | ||
CHRNA1 | XP_016858745.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |