Sequence 1: | NP_524219.1 | Gene: | alpha-Cat / 40517 | FlyBaseID: | FBgn0010215 | Length: | 917 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_054706.1 | Gene: | VCL / 7414 | HGNCID: | 12665 | Length: | 1134 | Species: | Homo sapiens |
Alignment Length: | 1151 | Identity: | 243/1151 - (21%) |
---|---|---|---|
Similarity: | 428/1151 - (37%) | Gaps: | 330/1151 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 TMSVEKTLEPLVLQVTTLV--NTKGPSKKKKGKS-KRASALVAAVEKATENFIQKGEQIAYENPD 90
Fly 91 --ITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVH 153
Fly 154 LLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDPQLRDDLAAARAM 218
Fly 219 LKKHSTMLLTASKVYV-----RHPELDLAKVNRDFILKQVCDAVNTI------------------ 260
Fly 261 ------------SDVAQGK------SSQPTDIYSGA-----------GELAAALD---------- 286
Fly 287 ---------------------------DFDEGI------------VMDPMTYSEKRSRQLL---- 308
Fly 309 ------------EERLESIISAAALMADADCTRDERRE---RIVAECNAVRQALQDL-------- 350
Fly 351 ---------LSEYMSNMSQKDN---------------------------SP-----GLSRA---- 370
Fly 371 --------------------------IDQMCRK-------------------------TRDLRRQ 384
Fly 385 LRKAVVDHVSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKLVEVANLVCSMS 444
Fly 445 N-NEDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDI 508
Fly 509 TTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTK 573
Fly 574 RVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVREIRRA------- 631
Fly 632 -------VLMNRSSEDL---------------------DTDTEF----------EPV----EDLT 654
Fly 655 LETRSRSS------AHTGDQTVDEY-----------PDISGICTAREAMRKMTEEDKQKIAQQVE 702
Fly 703 LFRREKLTFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGT 767
Fly 768 KLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQITSKVKADV---QNISGELIVSGLDSAT 829
Fly 830 S-LIQAAKNLMNAVVLTVKYSYVASTKYTRQGTVSSPIVVWKMKAP 874 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
alpha-Cat | NP_524219.1 | Vinculin | 87..877 | CDD:395830 | 224/1090 (21%) |
VCL | NP_054706.1 | N-terminal globular head. /evidence=ECO:0000269|PubMed:20484056 | 1..835 | 164/837 (20%) | |
Vinculin | 66..1134 | CDD:395830 | 224/1088 (21%) | ||
Talin-interaction. /evidence=ECO:0000250|UniProtKB:P12003 | 168..208 | 10/39 (26%) | |||
3 X 112 AA tandem repeats. /evidence=ECO:0000255 | 259..589 | 37/330 (11%) | |||
Interaction with ACTN4. /evidence=ECO:0000269|PubMed:15988023, ECO:0007744|PDB:1YDI | 741..764 | 6/22 (27%) | |||
Linker (Pro-rich). /evidence=ECO:0000269|PubMed:20484056 | 836..878 | 2/41 (5%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 857..887 | 4/29 (14%) | |||
C-terminal tail. /evidence=ECO:0000269|PubMed:20484056 | 879..1134 | 76/269 (28%) | |||
Facilitates phospholipid membrane insertion. /evidence=ECO:0000250|UniProtKB:Q64727 | 1003..1046 | 13/44 (30%) | |||
Facilitates phospholipid membrane insertion. /evidence=ECO:0000250|UniProtKB:Q64727 | 1120..1134 | 3/12 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3681 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |