DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Cat and Ctnnal1

DIOPT Version :9

Sequence 1:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_061231.3 Gene:Ctnnal1 / 54366 MGIID:1859649 Length:731 Species:Mus musculus


Alignment Length:877 Identity:215/877 - (24%)
Similarity:363/877 - (41%) Gaps:219/877 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LEIRTMSVEKTLEPLVLQVTTLVNTKGPSKKKKGKSKRASALVAAVEKATENFIQKGEQIAYENP 89
            |||||.|||:||.|||.|:|||:|.|..:||.....:....:..||..|...|::.||.||.||.
Mouse    29 LEIRTRSVEQTLLPLVSQITTLINHKDNTKKSDKTLQAIQRVGQAVNLAVGRFVKVGEAIANENW 93

  Fly    90 DITQEMLTAVDEVKKTGDAMS----IAAREF--SEDPCSSL--KRGNMVRAARNLLSAVTRLLIL 146
            |:.:|:..|..|.|:.|:.::    :..|..  |:...:.|  |.| :|:|||.|||:||::|:|
Mouse    94 DLKEEINIACIEAKQAGETIASLTDVTKRSHLESDGQVTILTDKTG-VVQAARLLLSSVTKVLLL 157

  Fly   147 ADMVDVHLLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDPQLRDD 211
            ||.|.:..::.|.:.:...:.:|:..:|..|.:....|||....|.......||.:|||.:.:..
Mouse   158 ADRVVIKQIVTSRNKILATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAR 222

  Fly   212 LAAARAMLKKHSTMLLTASKVYVRHPELDLAKVNRDFILKQVCDAVNTISDVA-----QGKS-SQ 270
            :|.|||:|:|.:.|||||||..:|||..:.|..|::.:..::..|:..::::.     .|:: |.
Mouse   223 MAVARAVLEKGTMMLLTASKTCLRHPSCESAHTNKEGVFDRMRVALEKVTEIVTDCRLSGETDSS 287

  Fly   271 PTDIYSGAGELAAALDDFDEGIVMDPMTYSEKRSRQLLEERLESIISAAALMADADCTRDERRER 335
            ...|::|..||...::...|.:..:        |::.|...||:::.......|:..|..|.|||
Mouse   288 SVSIFTGIKELKVNIEALRENVCFE--------SKENLSAALEAVLEHVEDFTDSAYTSHEHRER 344

  Fly   336 IVAECNAVRQALQDLLSEYMSNMSQKDNSPG---------LSRAIDQMCRK----TRDLRRQLRK 387
            |:...:..|..||.|||.:|...|:|..|..         :|.::|::.|:    ...|...|.|
Mouse   345 ILELSSQARTELQQLLSVWMQTQSRKTKSAAEELELTVLKISHSLDELRRELHCTAMQLAADLLK 409

  Fly   388 AVVDHVSDSFLETTTPLLDLIEAAKSGNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNEDGVKM 452
            ...|||....|:.|         ...||.:.:.|.:...::..|:|||...|:..:|..|.....
Mouse   410 FHADHVVLKALKVT---------GVEGNLEALAEYACKLSEQKEQLVETCRLLRHISGTEPLEIT 465

  Fly   453 VRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAV 517
            ..:|....:....|:|:||..||:.|:||:|:||:..:.:|||.|       :.|:.|:      
Mouse   466 CIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQ-------MSDMATL------ 517

  Fly   518 SENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVL 582
                                   ||..:...:||....|                          
Mouse   518 -----------------------LREISDVFEGRRGERC-------------------------- 533

  Fly   583 RDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTDTEF 647
                                                                             
Mouse   534 ----------------------------------------------------------------- 533

  Fly   648 EPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAMRKMTEEDKQKIAQ---QVELFRREKL 709
               :.|:|...:::||:......|: ||               .|::.|||:   ::.|...:. 
Mouse   534 ---DHLSLPKPTKNSANLKSLKPDK-PD---------------SEEQAKIAKLGLKLGLLSSDA- 578

  Fly   710 TFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDKLTR 774
              |.|:.||:|..|:|:...::|..:...:..||||.|||||:.|:|:..:..:..|.||....:
Mouse   579 --DCEIEKWEDEENEIVRHGRNMSRMAYSLYLFTRGEGPLKTSQDLIHFLEVFAAEGLKLTSSVQ 641

  Fly   775 EIAEQCPESSTKKDLLAYLQRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSL-----IQA 834
            ..::|..:.. |..||..:.::...|||:|..:|              :.|.|...|     |..
Mouse   642 SFSKQLKDDD-KLMLLLEINKLIPLCHQLQTITK--------------TSLQSKVFLKVDKCITK 691

  Fly   835 AKNLMNAVV--LTVKYSYVASTKYTRQGTVSS 864
            .:::|..||  |::.|..:...:..|.|:.::
Mouse   692 IRSMMTLVVQLLSLCYKLLKKMENNRWGSATN 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatNP_524219.1 Vinculin 87..877 CDD:395830 186/815 (23%)
Ctnnal1NP_061231.3 Vinculin 91..674 CDD:279395 174/750 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..559 7/39 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3681
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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