DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Cat and ctnna1

DIOPT Version :9

Sequence 1:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_571531.1 Gene:ctnna1 / 30741 ZFINID:ZDB-GENE-991207-24 Length:907 Species:Danio rerio


Alignment Length:912 Identity:556/912 - (60%)
Similarity:717/912 - (78%) Gaps:18/912 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TLTDFGQIALKWDPKNLEIRTMSVEKTLEPLVLQVTTLVNT--KGPSKKKKGKSKRASALVAAVE 71
            |..:...|..|||||:|||||::||:.|||||.|||||||:  ||||.||||:||:|..|.|:|:
Zfish     2 TSINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHVLAASVD 66

  Fly    72 KATENFIQKGEQIAYENPDITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSSLKRGNMVRAARNL 136
            :||:||::|||:||.|:..:.:|:..||::|:|.|::|.:|:.||:||||||:||||||||||.|
Zfish    67 EATQNFLEKGEKIAKESQFLKEELTAAVEDVRKQGESMKMASGEFAEDPCSSVKRGNMVRAARAL 131

  Fly   137 LSAVTRLLILADMVDVHLLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQ 201
            |||||.||:||||.||:.||..|.:||::|.|::||.::.:|....:.......:|...||||||
Zfish   132 LSAVTHLLVLADMADVYQLLLQLKLVEENLMKVRNAGTEQDLGIQYKALKPEVDKLNMMAAKRQQ 196

  Fly   202 ELKDPQLRDDLAAARAMLKKHSTMLLTASKVYVRHPELDLAKVNRDFILKQVCDAVNTISDVAQG 266
            ||||...:|.:||||.:|:::..||.|||:..::||::...|.|||.|.||:..||:.||:.||.
Zfish   197 ELKDVHHKDQMAAARGVLQRNVPMLYTASRACLQHPDVAAYKANRDLIYKQLQHAVSGISNAAQA 261

  Fly   267 KSSQPTDI--YSGAGELAAALDDFDEGIVMDPMTYSEKRSRQLLEERLESIISAAALMADADCTR 329
            .||:.:..  .:|.||||.||::||:.|::||:::||:|.|..||||||||||.||||||:.|||
Zfish   262 TSSEDSSFSQTAGGGELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTR 326

  Fly   330 DERRERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDHVS 394
            |:||||||||||:|||||||||||||.|..:|:.|..|:.|||:|.:|||||||||||||:||||
Zfish   327 DDRRERIVAECNSVRQALQDLLSEYMGNAGRKEKSDALNTAIDRMTKKTRDLRRQLRKAVMDHVS 391

  Fly   395 DSFLETTTPLLDLIEAAKSGNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNEDGVKMVRYAAAQ 459
            ||||||..|||.||||||:||||:|:|.:::|.:||.||:|||||.||:||||:|||:||.||:|
Zfish   392 DSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMAASQ 456

  Fly   460 IESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILE 524
            :|:|||||||||..|..:|||||||:||..::..||.|||:||:||||||:|||||.||||||||
Zfish   457 LETLCPQVINAALALAAKPNSKVAQDNMDLFKDQWEKQVRVLTDAVDDITSIDDFLCVSENHILE 521

  Fly   525 DVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQVMMK 589
            ||||||:|||..|...|..|||||:||::||.:||.:|||||.|.:||::||||.|:|.:.||.:
Zfish   522 DVNKCVIALQEKDVDGLDRTAGAIRGRAARVVHVVTSEMDNYMPGVYTEKVLEATKLLTETVMPR 586

  Fly   590 FDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTDTEFEPVEDLT 654
            |.::|.|||.|||.|:.:.||||:|||||||||||||:||:||||.|:.|:|| |::|| .||  
Zfish   587 FTEQVEAAVEALSANNGQPVDENEFIDASRLVYDGVRDIRKAVLMIRTPEELD-DSDFE-TED-- 647

  Fly   655 LETRSRSSAHTGDQTVDEYPDISGICTAREAMRKMTEEDKQKIAQQVELFRREKLTFDSEVAKWD 719
            .::|||:|..|.|..:     |:| .:||..|.::.:|.|.|||:||..|:.||...|:||:|||
Zfish   648 FDSRSRTSVQTEDDQL-----IAG-QSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWD 706

  Fly   720 DTGNDIIFLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESS 784
            |:|||||.|||.||||||||||||||:||||.|.|||:|||||:|||:::|||.|.||:|||:|:
Zfish   707 DSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRAIADQCPDSA 771

  Fly   785 TKKDLLAYLQRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYS 849
            .|:|||||||||||:|||:.|.|||||:|||:.|||:|||||||.|||||||||||:||.|||.|
Zfish   772 CKQDLLAYLQRIALFCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNSVVSTVKAS 836

  Fly   850 YVASTKYTRQGTVSS---PIVVWKMKAPEKKPLVRPEKPEEVRA-KVRKGSQKKVQNPIHALSEF 910
            |||||||.:...:.|   |.:.||||||||||||:.||.::.:. ||::.||||..||:.|||||
Zfish   837 YVASTKYQKSQDMQSLNMPAISWKMKAPEKKPLVKREKLDDGQTNKVKRSSQKKHINPVQALSEF 901

  Fly   911 QS 912
            ::
Zfish   902 KA 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatNP_524219.1 Vinculin 87..877 CDD:395830 487/794 (61%)
ctnna1NP_571531.1 Vinculin 82..867 CDD:279395 487/794 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 691 1.000 Domainoid score I128
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1061 1.000 Inparanoid score I244
OMA 1 1.010 - - QHG56187
OrthoDB 1 1.010 - - D405587at33208
OrthoFinder 1 1.000 - - FOG0002407
OrthoInspector 1 1.000 - - otm25961
orthoMCL 1 0.900 - - OOG6_103558
Panther 1 1.100 - - O PTHR18914
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2575
SonicParanoid 1 1.000 - - X1596
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.010

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