DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Cat and Ctnna1

DIOPT Version :10

Sequence 1:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_033948.1 Gene:Ctnna1 / 12385 MGIID:88274 Length:906 Species:Mus musculus


Alignment Length:911 Identity:562/911 - (61%)
Similarity:716/911 - (78%) Gaps:17/911 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TLTDFGQIALKWDPKNLEIRTMSVEKTLEPLVLQVTTLVNT--KGPSKKKKGKSKRASALVAAVE 71
            |....|.|..|||||:|||||::||:.|||||.||||||||  ||||.||:|:||:|..|.|:||
Mouse     2 TAVHAGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVE 66

  Fly    72 KATENFIQKGEQIAYENPDITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSSLKRGNMVRAARNL 136
            :|||||::||::||.|:..:.:|::.||::|:|.||.|..||.||::|||||:||||||||||.|
Mouse    67 QATENFLEKGDKIAKESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARAL 131

  Fly   137 LSAVTRLLILADMVDVHLLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQ 201
            |||||||||||||.||:.||..|.:|||.:.||:||.::.:|....:.......:|...||||||
Mouse   132 LSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQ 196

  Fly   202 ELKDPQLRDDLAAARAMLKKHSTMLLTASKVYVRHPELDLAKVNRDFILKQVCDAVNTISDVAQG 266
            ||||...||.:||||.:|:|:..:|.|||:..::||::...|.|||.|.||:..||..||:.||.
Mouse   197 ELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQA 261

  Fly   267 KSSQPTDIYSG--AGELAAALDDFDEGIVMDPMTYSEKRSRQLLEERLESIISAAALMADADCTR 329
            .:|.....:.|  .||||.||::||:.|::||:::||:|.|..||||||||||.||||||:.|||
Mouse   262 TASDDAAQHQGGSGGELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTR 326

  Fly   330 DERRERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDHVS 394
            |:||||||||||||||||||||||||.|..:|:.|..|:.|||:|.:|||||||||||||:||||
Mouse   327 DDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVS 391

  Fly   395 DSFLETTTPLLDLIEAAKSGNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNEDGVKMVRYAAAQ 459
            ||||||..|||.||||||:||||:|:|.:::|.:||.||:|||||.||:||||:|||:||.:|:|
Mouse   392 DSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQ 456

  Fly   460 IESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILE 524
            :|:|||||||||..|..:|.||:|||||..:::.||.|||:||:||||||:||||||||||||||
Mouse   457 LEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILE 521

  Fly   525 DVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQVMMK 589
            ||||||:|||..|...|..|||||:||::||.:||.:|||||||.:||::||||.|:|.:.||.:
Mouse   522 DVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPR 586

  Fly   590 FDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTDTEFEPVEDLT 654
            |.::|.|||.|||::..:.:|||:|||||||||||:|:||:||||.|:.|:|| |::|| .||  
Mouse   587 FTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELD-DSDFE-TED-- 647

  Fly   655 LETRSRSSAHTGDQTVDEYPDISGICTAREAMRKMTEEDKQKIAQQVELFRREKLTFDSEVAKWD 719
            .:.|||:|..|.|..:     |:| .:||..|.::.:|.|.|||:||..|:.||...|:||:|||
Mouse   648 FDVRSRTSVQTEDDQL-----IAG-QSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWD 706

  Fly   720 DTGNDIIFLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESS 784
            |:|||||.|||.||||||||||||||:||||.|.|||:|||||:|||:::|||.|.||:.||:|:
Mouse   707 DSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSA 771

  Fly   785 TKKDLLAYLQRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYS 849
            .|:|||||||||||||||:.|.|||||:|||:.|||:|||:|||.||||||||||||||.|||.|
Mouse   772 CKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKAS 836

  Fly   850 YVASTKYTR-QG--TVSSPIVVWKMKAPEKKPLVRPEKPEEVRAKVRKGSQKKVQNPIHALSEFQ 911
            |||||||.: ||  :::.|.|.||||||||||||:.||.:|.:.|:::.||||..||:.|||||:
Mouse   837 YVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFK 901

  Fly   912 S 912
            :
Mouse   902 A 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatNP_524219.1 Vinculin 26..877 CDD:460040 533/857 (62%)
Ctnna1NP_033948.1 Involved in homodimerization. /evidence=ECO:0000250 2..228 129/225 (57%)
Vinculin 19..867 CDD:460040 533/857 (62%)
Interaction with JUP and CTNNB1. /evidence=ECO:0000250 97..148 39/50 (78%)
Interaction with alpha-actinin. /evidence=ECO:0000250 325..394 53/68 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 864..894 16/29 (55%)

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