DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Cat and ctnna1

DIOPT Version :9

Sequence 1:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_002932348.2 Gene:ctnna1 / 100493479 XenbaseID:XB-GENE-479599 Length:903 Species:Xenopus tropicalis


Alignment Length:904 Identity:557/904 - (61%)
Similarity:710/904 - (78%) Gaps:15/904 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GQIALKWDPKNLEIRTMSVEKTLEPLVLQVTTLVNT--KGPSKKKKGKSKRASALVAAVEKATEN 76
            |.|..|||||:|||||::||:.|||||.|||||||:  ||||.||||:||:|..|.|:||:||:|
 Frog     6 GNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHVLAASVEQATQN 70

  Fly    77 FIQKGEQIAYENPDITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSSLKRGNMVRAARNLLSAVT 141
            |:.||::||.|:..:.:|::.||::|:|.|:.|..|:.||::|||||:||||||||||.||||||
 Frog    71 FLDKGDKIAKESQFLKEELIAAVEDVRKQGEQMRSASGEFADDPCSSVKRGNMVRAARALLSAVT 135

  Fly   142 RLLILADMVDVHLLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDP 206
            ||||||||.||:.||..|.:||:.:.||:||.::.:|....:.......:|....|||||||||.
 Frog   136 RLLILADMADVYRLLVQLKVVEEGIVKLRNAGTEQDLGIQYKALKAEVDKLNVMTAKRQQELKDI 200

  Fly   207 QLRDDLAAARAMLKKHSTMLLTASKVYVRHPELDLAKVNRDFILKQVCDAVNTISDVAQGKSSQP 271
            ..||.:||||.:|:|...:|.|||:..::||::...|.|||.|.||:..||..||:.||..||:.
 Frog   201 GHRDQMAAARGILQKSIPILYTASQACLQHPDVAAFKANRDLIYKQLQQAVTGISNAAQATSSEE 265

  Fly   272 TDIYSGAGELAAALDDFDEGIVMDPMTYSEKRSRQLLEERLESIISAAALMADADCTRDERRERI 336
            |....|.||||.||::||:.|::||:.:||:|.|..||||||||||.||||||:.||||:|||||
 Frog   266 TAHQQGGGELAVALNNFDKQIIVDPLGFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERI 330

  Fly   337 VAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETT 401
            |||||:|||||||||||||.|..:|:.|..|:.|||:|.||||||||||||||:||||||||||.
 Frog   331 VAECNSVRQALQDLLSEYMGNTGRKERSDALNSAIDKMTRKTRDLRRQLRKAVMDHVSDSFLETN 395

  Fly   402 TPLLDLIEAAKSGNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNEDGVKMVRYAAAQIESLCPQ 466
            .|||.||||||:||||:|:|.:::|.:||.||:|||||.||:||||:|||:||.:|..:||:|||
 Frog   396 VPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRISAGHLESMCPQ 460

  Fly   467 VINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVM 531
            |||||..|..:|:||:|||.|..:::.||.|||:||:||||||:||||||||||||||||||||:
 Frog   461 VINAALALAAKPHSKMAQETMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVI 525

  Fly   532 ALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQVMMKFDQRVGA 596
            |||..|...|..|||||:||::||.:||.:|||||||.:||::||||.|:|.:.||.:|.::|.|
 Frog   526 ALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEA 590

  Fly   597 AVGALSNNSNKDVDENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRS 661
            ||.|||.::|:.:|||:|||||||||||:|:||:||||.|:.|:|| |::|| .||  .:.|||:
 Frog   591 AVEALSGDTNQTMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELD-DSDFE-TED--FDVRSRT 651

  Fly   662 SAHTGDQTVDEYPDISGICTAREAMRKMTEEDKQKIAQQVELFRREKLTFDSEVAKWDDTGNDII 726
            |..|.|..:     |:| .:||..|.::.:|.|.|||:||..|:.||...|:||:||||.|||||
 Frog   652 SVQTEDDQL-----IAG-QSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDNGNDII 710

  Fly   727 FLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLA 791
            .|||.||||||||||||||:||||.|.|||:|||||:|||:::|||.|.||:.||:|:.|:||||
 Frog   711 VLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLA 775

  Fly   792 YLQRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTKY 856
            |||||||||||:.|.|||||:|||:.|||:|||:|||.||||||||||||||.|||.||||||||
 Frog   776 YLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKY 840

  Fly   857 TR-QG--TVSSPIVVWKMKAPEKKPLVRPEKPEEVRAKVRKGSQKKVQNPIHALSEFQS 912
            .: ||  :::.|.|.||||||||||||:.||.:|.:.|:::.||||..||:.|||||::
 Frog   841 QKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKA 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatNP_524219.1 Vinculin 87..877 CDD:395830 488/792 (62%)
ctnna1XP_002932348.2 Vinculin 18..864 CDD:366435 529/855 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 653 1.000 Domainoid score I156
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1069 1.000 Inparanoid score I251
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405587at33208
OrthoFinder 1 1.000 - - FOG0002407
OrthoInspector 1 1.000 - - otm49298
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1596
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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