DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Cat and ctnnal1

DIOPT Version :9

Sequence 1:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001137526.1 Gene:ctnnal1 / 100034581 ZFINID:ZDB-GENE-060503-507 Length:754 Species:Danio rerio


Alignment Length:889 Identity:229/889 - (25%)
Similarity:380/889 - (42%) Gaps:227/889 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LEIRTMSVEKTLEPLVLQVTTLVNTKGPSKKKKGKSKRASALVA-AVEKATENFIQKGEQIAYEN 88
            |||:|.|||:||.|||.|:|||:|.|...||.: |:.||...|. ||..|...|:..||.||.||
Zfish    15 LEIQTRSVEQTLIPLVSQITTLINHKDKLKKTE-KTLRAIQRVGQAVSVAVGRFVAVGEAIAAEN 78

  Fly    89 PDITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSS-------LKRGNMVRAARNLLSAVTRLLIL 146
            .|:.:||..|..|.::.|..::......|.:.|..       ..|..||:|||.|||:||::|:|
Zfish    79 EDLKEEMGLACFEARRAGTGIAQLTDVSSLEHCDGDGRSTVFSDRTGMVKAARMLLSSVTKVLVL 143

  Fly   147 ADMVDVHLLLKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDPQLRDD 211
            ||.:.:..::.|.:.|...|.:|:..|:..|.:....|||....|.......||.:|||.:.|..
Zfish   144 ADCIVIKQIISSRNKVLVTLEQLERVSTFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKRAR 208

  Fly   212 LAAARAMLKKHSTMLLTASKVYVRHPELDLAKVNRDFI-------LKQVCDAVNTISDVAQGKSS 269
            :|||||:|:|.:.|||||||..:|||:.:.|::|::.:       |:||.:.|.......:.| :
Zfish   209 MAAARAVLEKCTMMLLTASKTCLRHPDCESARINKEAVFQRMRIALEQVIEIVTDTRSSGEAK-A 272

  Fly   270 QPTDIYSGAGEL---AAALDDFDEGIVMDPMTYSEKRSRQLLEERLESIISAAALMADADCTRDE 331
            .|..||:|..:.   ..||.|...|:           |.:.:..:||:::.......|:..||.|
Zfish   273 LPVSIYAGIKDFKVKVEALRDSLYGV-----------SCEAVAAQLEALVEKTEDFTDSAYTRHE 326

  Fly   332 RRERIVAECNAVRQALQDLLS--EYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDHVS 394
            :||.|:..|...||..:.|::  .:..::..|:.:..:..:|.:.|:...|||::|.|..|..  
Zfish   327 QRETIIQLCQITRQETKQLINTWRHAQSLKAKEATDEMELSILKTCQCVSDLRQELHKVAVGR-- 389

  Fly   395 DSFLETTTPLLDL------IEAAKS----GNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNEDG 449
                  .|.||.|      ::|.|:    ||.:.|.:.:...|:|.|:|||...|:|.:|..|..
Zfish   390 ------ATELLKLHSDHLVLQALKASGGDGNLEAVADYASTLTEHNEQLVETCRLLCHVSGTEPL 448

  Fly   450 VKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDF 514
            .....:|......:.||:|:||..|.:.|.||:|:||:..:.:|||.|:                
Zfish   449 EITCIHAEETFRVIGPQIISAAQTLALHPTSKIAKENLDVFCEAWESQL---------------- 497

  Fly   515 LAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAV 579
                          |.||:.:.:..|                                       
Zfish   498 --------------CDMAILLKEIND--------------------------------------- 509

  Fly   580 KVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTD 644
                                                     |::|.|..::..|           
Zfish   510 -----------------------------------------VFEGRRGDKKTYL----------- 522

  Fly   645 TEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAMRKMTEEDKQKIAQ-QVELFRREK 708
                        :..|...|:           :.:.|.:.|  |:..|::..||: .:||.   .
Zfish   523 ------------SLPRPGKHS-----------ANLKTVKAA--KLDAEEQTTIAKLGLELC---L 559

  Fly   709 LT--FDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDK 771
            ||  .||||.:||:..::::.|.:.:..:...|..||||.|.||||.|:.:.|:.:|:.|.:|..
Zfish   560 LTSDVDSEVERWDEQDHEMVRLCQIISSMAYSMYLFTRGEGLLKTTSDLFHQAEVLSDQGLQLCP 624

  Fly   772 LTREIAEQCPESSTKKDLLAYLQRIALYCHQIQ------------ITSKVKADVQNISGELI--V 822
            :.:.::.|..:.. :..:::..::::..|.|:|            |..||.:.:||..|.||  |
Zfish   625 VLQSLSTQLLDED-RMLIISETEKLSSACQQLQACAKTPVQGKSAIFQKVDSSIQNTKGILILVV 688

  Fly   823 SGLDSATSLIQAAKNLMNAVVLTVKYSYVASTKYTRQGTVSSPI 866
            ..|.....||:..|:         :.|.:||.::.|:..:|:|:
Zfish   689 YLLPICNKLIRKCKS---------ERSCLASPQHWREKQLSAPV 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatNP_524219.1 Vinculin 87..877 CDD:395830 197/826 (24%)
ctnnal1NP_001137526.1 Vinculin 77..>510 CDD:279395 136/562 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3681
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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