DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and Ceacam5

DIOPT Version :9

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:NP_082756.1 Gene:Ceacam5 / 73250 MGIID:1920500 Length:947 Species:Mus musculus


Alignment Length:1004 Identity:175/1004 - (17%)
Similarity:328/1004 - (32%) Gaps:327/1004 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 IPEETCDNFNGYRIELRVL----VPPTEVVILDAKGDRIKNGSVVGPMQERQSLKATCTVRN-TR 193
            :|.:.|.:..|..:....|    :|.|..:.::.:..::..|..|           ...|.| |.
Mouse     7 LPCKWCTHLQGLLLTASFLTCCHLPTTAQITIELEPPQVIEGENV-----------LIRVNNLTE 60

  Fly   194 PQPEVSWFRGTK-------------RLTTYSPTHDLVDGLYTS-TLELDWTLSREDLA-QDIECR 243
            ....::||||.:             ::|...|.|...:.||:: :|:: :.:::||:. ..:...
Mouse    61 NLITLAWFRGMRIKSPQIGQYTPATKVTVLGPGHSGRETLYSNGSLQI-YNVTQEDIGFYSLRII 124

  Fly   244 VKSAAIQNVTVTKFSVDLQV--------RPT---SIDINGVKHHTVQGSKVVLTCDIHGARPAVN 297
            .|.|.|.::|    |:.|.|        .|:   .:.|..|.....:|..|:|... :..:..::
Mouse   125 NKHAEIVSIT----SIYLNVYSSLWTCEHPSPHAKLTIESVPPGISEGGSVLLLVK-NLPQNLLS 184

  Fly   298 LTWYNTTTIISSGENEITEVRSKSLEKSDGTFHTQSELIF------------NATRFENDRVFRC 350
            |.||.  .:|:..:.||......:.....|..||..|.:|            :.|.|...|....
Mouse   185 LFWYK--GVIAVKKFEIARHIKATNSSVPGPAHTGRETVFSNGSLLLQEVMQSDTGFYTLRTMST 247

  Fly   351 EAENIVLQINREKPISSALTLEVLYPPVVKVS--PSAITANTSEIVLLNCEYFAN-PASLTQVEW 412
            :.::.|..:   :.......|...:|..||:.  |..:....:.::|::     | |.......|
Mouse   248 DLKDEVAHV---QLYMDTYLLTCYHPLQVKIESLPQNVAVGKTVLLLVH-----NLPEDFQAFFW 304

  Fly   413 YRNDILVNVNDTTHYKG-------GNS--------ENVALVIKSTEKEDIGNYSCQLSNNIGKGT 462
            |::....:......||.       |::        .|.:::|....::|.|.:..::..      
Mouse   305 YKSAYRRDTYKIAEYKRAMDATILGSAYSSREFIYNNGSMLIIDVTEDDAGYFLLEILR------ 363

  Fly   463 SDQKINLDVQYAPTVEILMIPEGPVKESDESNVTLFCNVLDANPSVLTKVRWYANSTLLKELPDC 527
              :.:.::..|     |.:.....|..|.:|..|...::....||::.     ..|.||      
Mouse   364 --EDLKIEKAY-----IQLHVNSFVSNSKDSASTARLSIESVPPSIVE-----GGSVLL------ 410

  Fly   528 EETREDLCHIDPSKLLLESIGRGFFYNYSCEGFNAAGWGPRSEDK-ELLVHYEPGPAALSHFPLV 591
                  |.|..|..  |:|:   |:|.           |..:|.| ||:.|.             
Mouse   411 ------LVHNLPKN--LQSL---FWYK-----------GMIAEKKSELIQHI------------- 440

  Fly   592 AVKKKSVTFSCSVDDPGFPESNRFRWLRGGRGPLQDIVTKD---WTVEPVGLDSRTNYSCYAYNE 653
                  :..|.|:  ||...|.|......|...||.::..|   :|::.  :|:...|.      
Mouse   441 ------IATSSSL--PGPAHSGRETVYNNGSLLLQRVMQNDTQFYTLQT--MDTDLKYE------ 489

  Fly   654 GGKGVMATVNLEV--------HAPPFFIKNLPPYTGI-------LHSSPNATLTCRIECVPRCDI 703
                 :|.|.|::        |.....|::||....:       :|:.|.....          .
Mouse   490 -----VAHVQLQLDTSLSTWYHPLQVKIESLPRNVAVGKSVLFLVHNFPEVFRA----------F 539

  Fly   704 SWQKDG--------------------------------------VPIERNDSRYFIKEKYMDASP 730
            ||.|..                                      :.:..:|:.:::.|...:   
Mouse   540 SWYKPAYKSHTSKIVEYHRFTDSATVGAAYRGIEVIFTNGSMVMIDVTEDDAGFYMLEILRE--- 601

  Fly   731 ATGDF--ESMLSVLHFN--MPNWPDSKFNIEADNANYSCVSTGNIVGGSIRSRTYFGIEYAPENT 791
               ||  |.....||.|  :||   ||.::.....:...|.. :||||   ......:...|:|.
Mouse   602 ---DFKVEKAYVQLHVNSFVPN---SKVSVSTARLSIESVPP-SIVGG---ESVLLLVHNLPKNL 656

  Fly   792 TV---SENIVYVQEDTIPGRVICKSRANPEPSYKWIFKNETIANGNALIINTAMNRNDDGTYTCL 853
            ..   .:.::..::..:...:|..|.:.|.|::.   ..||:.:..:|::...| :||.|.||.|
Mouse   657 QSLFWYKGVIAEEKSELIQHIIATSSSLPGPAHS---GRETVYSNGSLLLQRVM-QNDTGFYTLL 717

  Fly   854 AYNKHGSSIAKTVIKVQFK--------------------PR------------CEIER------- 879
            ..:   :.:...:..||.:                    ||            |.:.:       
Mouse   718 TMS---TDLKDEIAHVQLQLDTSTCCSLLTSDQLIIVPVPRNIAVGKSVLLLVCNVPKDVQTIFW 779

  Fly   880 -QEIDDQDTLICTAYGNPIEADFSW--------------SIKTENETDENLGSGKKENSVEKSFY 929
             :.:...|......|...:|:.. |              |:..:|.|:.:.|....|        
Mouse   780 YKSVYRTDIFKIAEYSRSMESTI-WGLAHSGKEMVYTNGSLLIQNVTEHDAGLYMLE-------- 835

  Fly   930 ILQTDYAISRTYRCV-ANNTVGYGPFCEI 957
            ||..||.:.|.:..| .||.|.: ||..:
Mouse   836 ILHKDYKLERAHVQVHVNNPVSW-PFVRV 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 Ig 44..152 CDD:299845 3/17 (18%)
Ig 176..248 CDD:299845 16/87 (18%)
Ig 277..354 CDD:299845 17/88 (19%)
IG_like 383..463 CDD:214653 13/95 (14%)
Ig 394..463 CDD:143165 12/84 (14%)
Ig_3 585..652 CDD:290638 13/69 (19%)
Ig 685..>719 CDD:299845 5/71 (7%)
IG_like 788..869 CDD:214653 16/83 (19%)
Ig <811..869 CDD:299845 13/57 (23%)
Ceacam5NP_082756.1 Ig_CEACAM_D1 36..134 CDD:143251 20/109 (18%)
Ig_CEACAM_D1 156..258 CDD:143251 20/107 (19%)
Ig_CEACAM_D1 273..377 CDD:143251 17/121 (14%)
Ig_CEACAM_D1 393..496 CDD:143251 33/169 (20%)
Ig 510..614 CDD:299845 14/119 (12%)
Ig_CEACAM_D1 630..733 CDD:143251 23/113 (20%)
Ig_CEACAM_D1 748..852 CDD:143251 18/112 (16%)
IG_like 865..944 CDD:214653
IGc2 872..933 CDD:197706
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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