DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and Ceacam13

DIOPT Version :9

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:NP_081486.1 Gene:Ceacam13 / 69785 MGIID:1917035 Length:263 Species:Mus musculus


Alignment Length:198 Identity:43/198 - (21%)
Similarity:71/198 - (35%) Gaps:68/198 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 PISSALTLEVLYPPVVKVSPSAITANTSEIVLLNCEYFAN-PASLTQVEWYRN-------DILVN 420
            |.:|.||::.: ||:         |...|.|||   :..| |.::....||..       :|..:
Mouse    31 PTTSHLTIKAV-PPI---------AVEGENVLL---FVHNLPKNVKAFSWYSGAAPFKCCEIASH 82

  Fly   421 VNDTTHYKGGNS--------ENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKI---------- 467
            |..|.....|.:        .|.:|:|||..::|.|.|:.:..::    ||..:|          
Mouse    83 VIATNFTAVGLAHSGRETVLNNGSLLIKSVTRKDSGYYTLRTLDS----TSRPEIIRAEFFVHRP 143

  Fly   468 -----------NLDVQYAPTVEILMIPEGPVKESDESNVTLFCNVLDANPSVLTKVRWYANSTLL 521
                       .|.:|..|    |.:         |.|:.:|.:|.:. |..|....|:.....|
Mouse   144 LLGYKKHLTPSQLTIQLVP----LRV---------EENINIFLSVFNL-PKKLQVFAWHKGVLPL 194

  Fly   522 KEL 524
            :.|
Mouse   195 EHL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 Ig 44..152 CDD:299845
Ig 176..248 CDD:299845
Ig 277..354 CDD:299845
IG_like 383..463 CDD:214653 21/95 (22%)
Ig 394..463 CDD:143165 19/84 (23%)
Ig_3 585..652 CDD:290638
Ig 685..>719 CDD:299845
IG_like 788..869 CDD:214653
Ig <811..869 CDD:299845
Ceacam13NP_081486.1 Ig_CEACAM_D1 36..140 CDD:143251 28/120 (23%)
Ig 156..260 CDD:299845 13/56 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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