Protein Alignment nrm and side-III

DIOPT Version :10

• Sequence 1: NP_001246890.1
• Gene: nrm / 40515
• FlyBaseID: FBgn0262509
• Length: 2192
• Species: Drosophila melanogaster
• Sequence 2: NP_001036681.1
• Gene: side-III / 4379844
• FlyBaseID: FBgn0083949
• Length: 1689
• Species: Drosophila melanogaster
• Alignment Length: 637
• Identity: 143/637 - (22%)
• Similarity: 246/637 - (38%)
• Gaps: 137/637 - (21%)

  Fly     5 ALRQSAKDVAKSNCVAVRSSISLSLVLVLCLALVDSSTAQVD--------TTISQQE--SQSVVL 59
            |.|.|...:..|....:|.|......|.|..|.:..::.|:|        :|::.:.  .::..|
  Fly     5 AKRTSTMPLTTSYNANIRRSCLALFALFLFAAHISLTSGQIDWDDDDDPVSTVAVEAVLGRTASL 69

  Fly    60 PCPVDAE-KCGKLHSLNWF-------------KGDDRIAAMLLGDSNVTSVNKEFDERV--TVEQ 108
            ||.::.| |..:::.:.||             :|.....|:...|:|      .|..|.  ...|
  Fly    70 PCDIEPEAKDDRVYMVLWFRESAGKPLYSFDVRGRPFEKALYWSDTN------SFGPRAYFVTGQ 128

  Fly   109 NPYRLVIKDLKIADEDIYLCDTTFFIPEETCDNFNGYRIELRVLVPPTEVVILDAKGDRIKNGSV 173
            .|.:|.:.::::.||.:|.|...|    :.....| :||.|.|:|||.::::.||.|..:  ...
  Fly   129 QPAKLSVDNIQLDDEGVYRCRVDF----QNSPTRN-HRINLTVIVPPHQILVYDASGRDV--AGA 186

  Fly   174 VGPMQERQSLKATCTVRNTRPQPEVSWFRGTKRLTTYSPT----HDLVDGLYTSTLELDWTLSRE 234
            |||:.|..::..||.||..||:|.|:|..||:.|...|..    |..|:.|..:      .:||.
  Fly   187 VGPLLEGDNIVLTCEVRGGRPEPTVTWMNGTRTLEAGSGVSMGRHVTVNRLEVA------QISRS 245

  Fly   235 DLAQDIECRVKSAAIQNVTVTKFSVDLQVRPTSIDINGVKHHTVQGSKVVLTCDIHGARPAVNLT 299
            .|.....|:..:..:.........:::.::|||:::..........::..|||.:.|:.|...:.
  Fly   246 ALNNTYRCQASNTKLVAPVERSIRIEMLLKPTSVNLTNKLKVFASNTQYNLTCIVAGSVPDTEIK 310

  Fly   300 WYNTTTIISSGENEITEVRSKSLEKSDG------TFHTQSELIFNATRFENDRVFRCEAENIVLQ 358
            |.........|        ..|..:|:|      ||:.|.|        ::..:.:||..|..||
  Fly   311 WTQNNRPFKRG--------LLSTSQSNGRVISTLTFYPQPE--------DDGTMLKCEGSNPRLQ 359

  Fly   359 INREKPISSALTLEVLYPPVVKVSPSAITANTSEI-----VLLNCEYFANPAS-----------L 407
               ...|..:|.:.|:|||.|.:|..: |....:|     |...|...:||..           :
  Fly   360 ---NSAIEDSLMMNVIYPPQVTLSLGS-TLRPDDIKEGDDVYFECHIKSNPKEHRIMWSHDGQPV 420

  Fly   408 TQ-VEWYRNDILVNVNDTTHYKGGNSENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKINLDV 471
            || |.|   .|:::..             :||::...:...|.|:|..:|:.|: |....:||.:
  Fly   421 TQNVSW---GIIISTR-------------SLVLQRVGRIHSGFYACSAANDRGE-TQSAPVNLRI 468

  Fly   472 QYAPTVEILMIPEGPVKESDESNVTLFCNVLDANPSVLTKVRW---------------YA----- 516
            :|||......|.  .:..|.|.:|.:.|.|....|.:  ...|               ||
  Fly   469 RYAPVCSSSSIT--VIGASLEEDVPIPCRVNSDPPEI--DFEWTFSTSGEHFEVPSGHYATIQDP 529

  Fly   517 ----NSTLLKELPDCEETREDLCHIDPSKLLLESIGRGFFYNYSCEGFNAAG 564
                .|.:.:.:.:..||..:......|:|:....|...:...:|.|.||.|
  Fly   530 TMTTTSDVRRTVVESNETHFESYVETVSELIYTPKGERDYGTLACYGRNAIG 581

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nrm	NP_001246890.1	V-set	44..152	CDD:462230	28/133 (21%)
		Ig strand B	183..187	CDD:409353	0/3 (0%)
		Ig	<185..248	CDD:472250	20/66 (30%)
		Ig strand C	197..201	CDD:409353	1/3 (33%)
		Ig strand E	225..229	CDD:409353	0/3 (0%)
		Ig strand F	239..244	CDD:409353	1/4 (25%)
		Ig strand G	253..256	CDD:409353	0/2 (0%)
		Ig	277..354	CDD:472250	16/82 (20%)
		Ig strand B	283..287	CDD:409353	1/3 (33%)
		Ig strand C	297..301	CDD:409353	0/3 (0%)
		Ig strand E	333..337	CDD:409353	1/3 (33%)
		Ig strand F	347..352	CDD:409353	1/4 (25%)
		Ig_3	376..456	CDD:464046	20/96 (21%)
		Ig	676..779	CDD:472250
		Ig strand B	689..693	CDD:409353
		Ig strand C	702..706	CDD:409353
		Ig strand E	734..741	CDD:409353
		Ig strand F	762..767	CDD:409353
		Ig	<811..869	CDD:472250
		Ig strand C	820..824	CDD:143205
		Ig strand F	849..854	CDD:143205
		Ig strand G	862..865	CDD:143205
		PTZ00112	1747..>1940	CDD:240274
side-III	NP_001036681.1	V-set	59..166	CDD:462230	25/117 (21%)
		Ig_3	190..257	CDD:464046	21/72 (29%)
		Ig	289..359	CDD:472250	17/85 (20%)
		Ig strand C	308..312	CDD:409468	0/3 (0%)
		Ig strand E	335..338	CDD:409468	0/2 (0%)
		Ig strand F	348..353	CDD:409468	1/4 (25%)
		Ig_3	374..454	CDD:464046	20/96 (21%)