DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrm and kirre

DIOPT Version :9

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster


Alignment Length:860 Identity:170/860 - (19%)
Similarity:288/860 - (33%) Gaps:282/860 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VRSS--ISLSLVLVLCLALV----------------------DSSTAQVDTTISQQESQS----- 56
            :|||  :.|.|:|||.|.|:                      |||::...::.|...|.:     
  Fly     4 MRSSRLLVLPLILVLILTLLLQPIAVHAKSKKNKSSQSSHHGDSSSSSSSSSSSSGSSSAAASSA 68

  Fly    57 ------------------------------VVLPCPVDAEKCGKLHSLNWFKGDDRIAAMLLGDS 91
                                          |.|||.| .||.|   :|.|.|.|     ..||..
  Fly    69 NDESKPKGGDNGGQHFAMEPQDQTAVVGSRVTLPCRV-MEKVG---ALQWTKDD-----FGLGQH 124

  Fly    92 NVTSVNKEFDERVTVEQNPYRLVIKDLKIADEDIYLCDTTFFIPEETCDNFNGYR---IELRVLV 153
            ...|..:.:....:.|:..:.|.|..|.:.|:..|.|...   |....:  .|.|   .:|.|||
  Fly   125 RNLSGFERYSMVGSDEEGDFSLDIYPLMLDDDAKYQCQVG---PGPQGE--QGIRSRFAKLTVLV 184

  Fly   154 PPTEVVILDAKGDRIKNGSVVGPMQERQSLKATCTVRNTRPQPEVSWFRGTKRLTTYSPTH---D 215
            ||        :..:|..|..:...::|: ::..|..:..:|..|::|..|...:.|....:   .
  Fly   185 PP--------EAPKITQGDYLVTTEDRE-IELECVSQGGKPAAEITWIDGLGNVLTKGIEYVKEP 240

  Fly   216 LVDG-LYTSTLELDWTLSREDLAQDIECRVKSAAIQNVTVTKFSVDLQVRPTSI------DINGV 273
            |.|. ..|:...|.....:|.......|:.::.|.:.....|..::::..|..|      .:.|.
  Fly   241 LADSRRITARSILKLAPKKEHHNTTFTCQAQNTADRTYRSAKLLLEVKYAPKVIVSVVGGALAGG 305

  Fly   274 KHHTVQGSKVVLTCDIHGARPAVNLTWYNTTTIISSGENEITEVRSKSLEKSDGTFHTQSELIFN 338
            |  ..:|::|:|:|........::..|:....:::                  |.|.|:. :|.|
  Fly   306 K--IPEGAEVILSCQADANPHELSYRWFINDELMT------------------GDFTTKM-IIHN 349

  Fly   339 ATRFENDRVFRCEAENIVLQINREKPISSALTLEVLYPPVVKVSPSAITANTSEIVLLNCEYFAN 403
            .:|..:|.:.:||..|.|.:..:.|      .|::.:.||.:..|.::.|:....|.:.|:...|
  Fly   350 VSRQYHDAIVKCEVVNAVGKSEQSK------KLDISFGPVFRQRPVSVEADLGATVSMRCDVAGN 408

  Fly   404 PASLTQVEWYRNDILVNVNDTTHYKGGNSENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKIN 468
            |.  .::||        :::.:....|.:..:.|.:.|   |..|.|.|:...| |......:..
  Fly   409 PE--PEIEW--------ISENSDQVVGVAAELKLKVSS---ETAGRYFCKAVVN-GFPEIGAEAT 459

  Fly   469 LDVQYAPTVEILMIPEGPVKESDESNVTLFC--------------------NVLDANPSVLTKVR 513
            |.|:.||.:....:..|.|    ...|.:.|                    |:..|:|.:.    
  Fly   460 LYVKRAPIITSHKVQFGGV----GGRVKIDCLAFSIPKAEHILWSFEGKIINMSSADPDIY---- 516

  Fly   514 WYANSTLLKE--LPDCEETREDLCHIDPSKLLLESIGRGFFYNYSCEGFNAAGWGPRSEDKELLV 576
                  :.:|  ||  |..|        :.|::.......|..|:|...|:.|    .:...:.:
  Fly   517 ------IFEEHHLP--EGVR--------AALIIRDSKATHFGKYNCTVMNSYG----GDSLVITL 561

  Fly   577 HYEPG--PAAL----SHF---------PLVAVKKKSVTFSCSVDDPGFPESNR----FRWLR--- 619
            ..|||  |..|    |.|         .::.|.:|..:....:.....||::|    ...|:   
  Fly   562 LREPGNIPVLLVVMGSMFCVAIILMIVMIIIVYRKRRSRKKPMPADVIPEASRGGDKLNELKSEL 626

  Fly   620 ------------GGRG--------PLQDIVTKDWTV-----EPVGLDSRTNYSCYAYNEGGKGVM 659
                        ||.|        |:.|:..|..|:     .||..|.|     ::.:.||.   
  Fly   627 RSKAYDVEYSEAGGDGLAINLTQSPMPDVQMKGATLGVPLAGPVKFDER-----FSGDFGGD--- 683

  Fly   660 ATVNLEVHAPPFFIKNL-----PPYTGILHSSPNATLTCRIECVPRCDISWQKDGVPIERNDSRY 719
             ..|.:.|     ||||     ..|.|    ||.|                        ...:.|
  Fly   684 -RYNRQCH-----IKNLKNQQETAYKG----SPQA------------------------NGYAHY 714

  Fly   720 FIKEKYMDASPATGD 734
            |  |..:|.||..|:
  Fly   715 F--EYALDYSPPGGE 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 Ig 44..152 CDD:299845 28/145 (19%)
Ig 176..248 CDD:299845 13/75 (17%)
Ig 277..354 CDD:299845 14/76 (18%)
IG_like 383..463 CDD:214653 17/79 (22%)
Ig 394..463 CDD:143165 15/68 (22%)
Ig_3 585..652 CDD:290638 20/111 (18%)
Ig 685..>719 CDD:299845 3/33 (9%)
IG_like 788..869 CDD:214653
Ig <811..869 CDD:299845
kirreNP_001245505.1 Ig 87..183 CDD:299845 26/109 (24%)
IG_like 88..182 CDD:214653 26/107 (24%)
C2-set_2 189..279 CDD:285423 16/90 (18%)
Ig_2 307..379 CDD:290606 18/96 (19%)
I-set 382..462 CDD:254352 20/93 (22%)
IGc2 396..446 CDD:197706 13/62 (21%)
Ig 466..561 CDD:299845 19/122 (16%)
IG_like 478..561 CDD:214653 17/110 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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