DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and Psg17

DIOPT Version :9

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:NP_031703.1 Gene:Psg17 / 26437 MGIID:1347250 Length:475 Species:Mus musculus


Alignment Length:581 Identity:110/581 - (18%)
Similarity:190/581 - (32%) Gaps:219/581 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 PISSALTLEVLYPPVVKVSPSAITANTSEIVLLNCEYFANPASLTQVEWYRN-----------DI 417
            |.::.:|:|.|.|.||:          .|.|||..:..  |.:|....||:.           .:
Mouse    31 PTTARVTVEFLPPQVVE----------GENVLLRVDNL--PENLLGFVWYKGVASMKLGIALYSL 83

  Fly   418 LVNVNDTTHYKGGNS---ENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKINLDVQYA----- 474
            ..||:.|.....|..   .|.:|.|::...||.|.|:.:..:..|:..||..|.|.|..:     
Mouse    84 QYNVSVTGLKHSGRETLHRNGSLWIQNVTSEDTGYYTLRTVSQRGELVSDTSIFLQVYSSLFICE 148

  Fly   475 -------PTVEILMIPEGPVKESDESNVTLFCNVLDANPSVLTKVRWYANSTLLKELPDCEETRE 532
                   ||:|::     |...::..:|....:.|   |..|..:.||..:.:..:|        
Mouse   149 RPTTLVPPTIELV-----PASVAEGGSVLFLVHNL---PEYLISLTWYKGAVVFNKL-------- 197

  Fly   533 DLCHIDPSKLLLESIGRGFFYNYSCEGFNAAGWGPRSEDKELLVHYEPGPAALSHFPLVAVKKKS 597
            ::.....:|                   |::..||....:|.:  :..|...|          ::
Mouse   198 EIARYRTAK-------------------NSSVLGPAHSGRETV--FSNGSLLL----------QN 231

  Fly   598 VTFSCSVDDPGF---PESNRFRWLRGGRGPLQDIVTKDWTVEPVGLDSRTNYSCYAYNEGGKGVM 659
            ||:.    |.||   ...||:..:......||             :|:..:..|:          
Mouse   232 VTWK----DTGFYTLRTLNRYPRIELAHIYLQ-------------VDTSLSSCCH---------- 269

  Fly   660 ATVNLEVHAPPFFIKNLPPYTGILHSSPNATLTCRIECVPRCDI---SWQKDGVPIERNDSRYFI 721
                 .:.:|...|..|||     |::....:..::..:|. |:   ||.|              
Mouse   270 -----PLDSPQLSIDPLPP-----HAAEGGRVLLQVHNLPE-DVQTFSWYK-------------- 309

  Fly   722 KEKYMDASPATGDFESMLSVLHFNMPNWPDSKFNIEADNANYSCVSTGNIVGGSIRSR------- 779
                       |.:.::|              |.|    |.|| ::|.:|:.|..|||       
Mouse   310 -----------GVYSTIL--------------FQI----AKYS-IATKSIIMGYARSRRETVYTN 344

  Fly   780 ----------------------TYFGIEYAPENTTV----SENIVYVQEDT--IPGRVI--CKSR 814
                                  :..|:|.|.....|    ::.::...:.|  :.|.||  |.| 
Mouse   345 GSLLLQDVTEKDSGVYTLITTDSNMGVETAHVQVNVHKLATQPVIKATDSTVRVQGSVIFTCFS- 408

  Fly   815 ANPEPSYKWIFKNE--------TIANGNALIINTAMNRNDDGTYTCLAYNKHGSSIAKTVI 867
            .|...|.:|:|.|:        |::.....:....:.:.|.|.|.|.|:|...|..:..||
Mouse   409 DNTGVSIRWLFNNQRLQLTERMTLSPSKCQLWIRTVRKEDAGEYQCEAFNPVSSKTSLPVI 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 Ig 44..152 CDD:299845
Ig 176..248 CDD:299845
Ig 277..354 CDD:299845
IG_like 383..463 CDD:214653 20/93 (22%)
Ig 394..463 CDD:143165 19/82 (23%)
Ig_3 585..652 CDD:290638 12/69 (17%)
Ig 685..>719 CDD:299845 5/36 (14%)
IG_like 788..869 CDD:214653 22/96 (23%)
Ig <811..869 CDD:299845 17/65 (26%)
Psg17NP_031703.1 Ig_CEACAM_D1 36..140 CDD:143251 30/115 (26%)
IG_like 45..136 CDD:214653 24/102 (24%)
Ig_CEACAM_D1 156..260 CDD:143251 27/167 (16%)
Ig_CEACAM_D1 276..380 CDD:143251 26/153 (17%)
IG_like 280..380 CDD:214653 25/149 (17%)
IGc2 400..461 CDD:197706 17/61 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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