DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and Ceacam10

DIOPT Version :9

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:NP_031701.3 Gene:Ceacam10 / 26366 MGIID:1347248 Length:265 Species:Mus musculus


Alignment Length:288 Identity:63/288 - (21%)
Similarity:99/288 - (34%) Gaps:85/288 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KLHSLNWFKGDDRIAAMLLGDSNVTSVNKEFDERVTVEQNPYRLVIKDLKIADEDIYLCDTTFFI 134
            :|.|.:..||......:||..|.:|..:.....:||||..|                        
Mouse     2 ELASAHLHKGQVPWVGLLLTASLLTYWSPATTAQVTVEAVP------------------------ 42

  Fly   135 PEETCDNFNGYRIELRVLV---PPTEVVILDAKGDRIKNGSVVGPMQ---ERQSLKATCTVRNTR 193
            |..|.||      .:.:||   |.|..|....||:.....:.:|...   .|..:....:.|.|.
Mouse    43 PNVTADN------NVLLLVHNLPQTLRVFYWYKGNSGAGHNEIGRFVTSINRSKMGLAHSGRETI 101

  Fly   194 PQPEVSWFRGTKRLTTYSPTHDLVDGLYTSTLELDWTLSREDLAQDIECRVKSAAIQNVTVTKFS 258
            ......:|:...:       :|  :|:||..: ||                     ||..:|..|
Mouse   102 YSNGSLFFQSVTK-------ND--EGVYTLYM-LD---------------------QNFEITPIS 135

  Fly   259 VDLQVRPT-----------SIDINGVKHHTVQGSKVVLTCDIHG-ARPAVNLTWYNTTTIISSGE 311
            |...|.|:           .:.:..|:.:..:|..|:|.  :|. .|....:.||..||   :||
Mouse   136 VRFHVHPSLLPSLSPPTTGQVTVEAVRPNVAEGENVLLL--VHNLPRTLRAIYWYRGTT---AGE 195

  Fly   312 -NEITEVRSKSLEKSDGTFHTQSELIFN 338
             |||....:.|.:...|..|:..|:|:|
Mouse   196 RNEIARFITASNKIILGPAHSDREIIYN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 Ig 44..152 CDD:299845 17/81 (21%)
Ig 176..248 CDD:299845 10/74 (14%)
Ig 277..354 CDD:299845 20/64 (31%)
IG_like 383..463 CDD:214653
Ig 394..463 CDD:143165
Ig_3 585..652 CDD:290638
Ig 685..>719 CDD:299845
IG_like 788..869 CDD:214653
Ig <811..869 CDD:299845
Ceacam10NP_031701.3 Ig_CEACAM_D1 36..140 CDD:319315 32/164 (20%)
Ig_CEACAM_D1 156..260 CDD:319315 21/73 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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