Protein Alignment nrm and Sirpa

DIOPT Version :9

• Sequence 1: NP_001246890.1
• Gene: nrm / 40515
• FlyBaseID: FBgn0262509
• Length: 2192
• Species: Drosophila melanogaster
• Sequence 2: XP_006235013.1
• Gene: Sirpa / 25528
• RGDID: 3449
• Length: 513
• Species: Rattus norvegicus
• Alignment Length: 467
• Identity: 99/467 - (21%)
• Similarity: 168/467 - (35%)
• Gaps: 111/467 - (23%)

  Fly    31 LVLCLALVDS-----------STAQVDTTISQQESQSVVLPCPVDAEKCGKLHSLNWFKGDDR-- 82
            |:.||.|..|           ...|.|.::|.....|..|.|.|.:  ...:..:.||||:.:
  Rat    14 LLFCLLLSASCFCAGASGKELKVTQADKSVSVAAGDSATLNCTVSS--LTPVGPIKWFKGEGQNR 76

  Fly    83 --IAAMLLGD-----SNVTSVNKEFDERVTVEQNPYRLVIKDLKIADEDIYLCDTTF--FIPEET 138
              |.:.:.|:     :||:...|.       ....:.:.|.::...|...|.| ..|  .|.|..
  Rat    77 SPIYSFIGGEHFPRITNVSDATKR-------NNMDFSICISNVTPEDAGTYYC-VKFQKGIVEPD 133

  Fly   139 CDNFNGYRIELRVLVPPT--EVVILDAKGDRIKNGSVVGPMQERQSLKATCTVRNTRPQP-EVSW 200
            .:..:|....|.||..|:  ||...|::|            ...|::..||......|:. .:.|
  Rat   134 TEIKSGGGTTLYVLAKPSSPEVSGPDSRG------------SPGQTVNFTCKSYGFSPRNITLKW 186

  Fly   201 FRGTKRL----TTYSPTHDLVDGLYTSTLELDWTLSREDLAQDIECRVKSAAIQ----NVTVTKF 257
            .:..|.|    ||.|...::...: :||:.:  .||.||:...:.|.|....::    |.| ..|
  Rat   187 LKDGKELSHLETTISSKSNVSYNI-SSTVSV--KLSPEDIHSRVICEVAHVTLEGRPLNGT-ANF 247

  Fly   258 SVDLQVRPTSIDINGVKHHTVQGSKVVLTCDIHGARP-AVNLTWYNTTTIISSGENEITEVRSKS 321
            |..::|.||   :...:......|:|.|||.:....| |:.|.|      :.:|....|:.....
  Rat   248 SNIIRVSPT---LKITQQPLTPASQVNLTCQVQKFYPKALQLNW------LENGNLSRTDKPEHF 303

  Fly   322 LEKSDGTFHTQSELIFNATRFENDRVFRCEAE--------------------------------- 353
            .:..|||::..|..:.|::....|.||.|:.|
  Rat   304 TDNRDGTYNYTSLFLVNSSAHREDVVFTCQVEHDSQPAITENHTVRAFAHSSSGGSMETIPDNNA 368

  Fly   354 ----NIVLQINREKPISSALTLEVLYPPVVKVSPSAITANTSEIVLLNCEYFANPASLTQVEWYR 414
                |:.:.:.....:...|.:..||  ::::.......:||...|...|  .|...:|||:...
  Rat   369 YYNWNVFIGVGVACALLVVLLMAALY--LLRIKQKKAKGSTSSTRLHEPE--KNAREITQVQSLI 429

  Fly   415 NDILVNVNDTTH 426
            .| ..::||.|:
  Rat   430 QD-TNDINDITY 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nrm	NP_001246890.1	Ig	44..152	CDD:299845	25/118 (21%)
		Ig	176..248	CDD:299845	18/76 (24%)
		Ig	277..354	CDD:299845	21/114 (18%)
		IG_like	383..463	CDD:214653	12/44 (27%)
		Ig	394..463	CDD:143165	10/33 (30%)
		Ig_3	585..652	CDD:290638
		Ig	685..>719	CDD:299845
		IG_like	788..869	CDD:214653
		Ig	<811..869	CDD:299845
Sirpa	XP_006235013.1	V-set	38..147	CDD:284989	25/118 (21%)
		IG_like	41..146	CDD:214653	23/114 (20%)
		Ig	146..255	CDD:299845	30/124 (24%)
		IG_like	158..>222	CDD:214653	16/78 (21%)
		IgC	266..344	CDD:143166	21/83 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000