DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and LOC1280362

DIOPT Version :10

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:XP_061509780.1 Gene:LOC1280362 / 1280362 VectorBaseID:AGAMI1_005401 Length:1667 Species:Anopheles gambiae


Alignment Length:2161 Identity:674/2161 - (31%)
Similarity:984/2161 - (45%) Gaps:609/2161 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SLVLV-LCLALVDSSTAQVDTTISQQESQSVVLPCPVDAEKCGKLHSLNWFKGDDRIAAMLLGDS 91
            |:|:| |.:.|..|:|:..|..||....:.|.|.||:|...||:||||.||||.:|| |::.||.
Mosquito     3 SIVIVSLWILLHISNTSCQDEKISVLRGEKVELACPIDIATCGELHSLKWFKGTERI-AVVSGDG 66

  Fly    92 NVTSVNKEFDERVTV--EQNPYRLVIKDLKIADEDIYLCDTTFFIPEETCDNFNGYRIELRVLVP 154
            .|..|...:::|:::  |....||:.:.::|||||.|||:|||..|.|.|:|...|.:.|.|...
Mosquito    67 EVAKVEGSYNDRLSLSHEAQTSRLIFRSVEIADEDTYLCETTFLEPSELCENSGAYSVALNVNAV 131

  Fly   155 PTEVVILDAKGDRIKNGSVVGPMQERQSLKATCTVRNTRPQPEVSWFRGTKRLTTYSPTHDLVDG 219
            |:.:.:.|...:.|||||.:|||:|.|.|:..|.|...||:|.:||.| :.|:...:...:..:|
Mosquito   132 PSVITLQDGNRNSIKNGSHIGPMREGQDLQVVCEVYGARPEPVISWHR-SGRVVRDNLVVEEHNG 195

  Fly   220 LYTSTLELDWTLSREDLAQDIECRVKSAAIQNVTVTKFSVDLQVRPTSIDINGVKHHTVQGSKVV 284
            |||....|..||||::|.....|||:...::.....:|.:|||||||.|:::||:||||||:||:
Mosquito   196 LYTVKSTLSLTLSRQELGATYNCRVEMKDLKLSVDNQFHIDLQVRPTKINLSGVEHHTVQGTKVL 260

  Fly   285 LTCDIHGARPAVNLTWYNTTTIISSGENEITEVRSKSLEKSDGTFHTQSELIFNATRFENDRVFR 349
            |.|.:.|||||.|:||||::.:|:...:|:|.:.:|:..::||||.|.|::||.||||||....|
Mosquito   261 LQCQVSGARPAANMTWYNSSKLITEESSEMTSINTKTYLQNDGTFETISQMIFTATRFENGASMR 325

  Fly   350 CEAENIVLQINREKPISSALTLEVLYPPVVKVSPSAITANTSEIVLLNCEYFANPASLTQVEWYR 414
            |||:|||::.:.::|:...|||||:|||||.|.|..||.|.::..|:.|:|.||||||..|:|||
Mosquito   326 CEADNIVMREDMDRPLHDTLTLEVMYPPVVSVKPENITVNETQDFLIFCDYEANPASLESVKWYR 390

  Fly   415 NDILVNVNDTTHYKGGNSENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKINLDVQYAPTVEI 479
            |...:.:| :..|:|||.|..||:||::.:.|||.|:|:|||:||...||.::.:||.|.|||.:
Mosquito   391 NSQEIKLN-SVRYEGGNPEQTALLIKNSTRHDIGAYTCELSNSIGFDVSDNEVYVDVIYKPTVML 454

  Fly   480 LMIPEGPVKESDESNVTLFCNVLDANPSVLTKVRWYANSTLLKELPDCEE----TREDLCHIDPS 540
            .|.||.||.|:|::|:||.||::|.||.:||||||:.:...|||||:|||    |.|:||.:|||
Mosquito   455 TMDPEAPVIENDQANITLLCNIVDGNPMLLTKVRWFLDGEFLKELPECEEETLGTDENLCEVDPS 519

  Fly   541 KLLLESIGRGFFYNYSCEGFNAAGWGPRSEDKELLVHYEPGPAALSHFPLVAVKKKSVTFSCSVD 605
            |:||:::||.|..|||||||||||||..||:..|.|:||||.|::.|:|.:|:|::||||:||::
Mosquito   520 KMLLQNVGREFIGNYSCEGFNAAGWGDVSEENPLDVYYEPGNASMVHYPYIAIKRRSVTFNCSIE 584

  Fly   606 DPGFPESNRFRWLRGGRGPLQDIVTKDWTVEPVGLDSRTNYSCYAYNEGGKGVMATVNLEVHAPP 670
            |.|.|.:.|:||||||: |:.|:||..|||:||||||||.:||:||||||:|..|.|||||||||
Mosquito   585 DRGNPAATRYRWLRGGK-PVLDVVTPSWTVDPVGLDSRTTFSCFAYNEGGEGYPAEVNLEVHAPP 648

  Fly   671 FFIKNLPPYTGILHSSPNATLTCRIECVPRCDISWQKDGVPIERNDSRYFIKEKYMDASPATGDF 735
            .||:.|.||||.|.|:.|.:|:||:||:|.|.|||.|||:.|:.:|.||:|...|:.|.||||||
Mosquito   649 AFIQKLQPYTGALFSTANMSLSCRVECIPSCSISWFKDGIGIDESDERYYITNTYLPAEPATGDF 713

  Fly   736 ESMLSVLHFNMPNWPDSKFNIEADNANYSCVSTGNIVGGSIRSRTYFGIEYAPENTTVSENIVYV 800
            ||..|||||||..||:...:...|::|||||||.|..|..:||.||||:||.||||::|...:.|
Mosquito   714 ESAYSVLHFNMSAWPNGILDRIKDSSNYSCVSTNNSAGPGVRSTTYFGVEYPPENTSLSSTTISV 778

  Fly   801 QEDTIPGRVICKSRANPEPSYKWIFKNETIANGNALIINTAMNRNDDGTYTCLAYNKHGSSIAKT 865
            :|..||.:::|.|||.|||::.|....|.||.|:|||::..:.|:|.|.|||.|:||||:.....
Mosquito   779 EEGKIPPKIVCSSRAYPEPAFYWTRNGEIIAKGSALIVDDVLERSDAGKYTCTAFNKHGNHSTDA 843

  Fly   866 VIKVQFKPRCEIERQEIDDQDTLICTAYGNPIEADFSWSIKTENETDENLGSGKKENSVEKSFYI 930
            .|.:.:||.|:|.|:|::|:|.|||.|.|:|.|::|.||:|..|   ::|.|.:.::...:|:..
Mosquito   844 YIDIHYKPTCQIMRKEVEDEDVLICVATGSPRESEFEWSVKYAN---DSLQSHRIKSDPYESYLT 905

  Fly   931 LQTDYAISRTYRCVANNTVGYGPFCEIEVAEQLAWWQLWEKNTLIILVAAILGLLLTVIVICCII 995
            |....:..|.|.|||:|.||.|..||||||..:|||...:..|..||:.|:..|||.||::|.||
Mosquito   906 LDDAVSAMRIYVCVASNNVGMGTPCEIEVAGYVAWWLKGDVLTPYILIGAVAALLLAVILVCIII 970

  Fly   996 ICICRRRRRQDKYLTEVPINSIQSA----LSDQLDMSR---AGRNLSTQDKCTAILPNPSSSRFI 1053
            ||||||:|||:|  :.:.:..|:.|    :.|:..:.|   |..|:...|:..            
Mosquito   971 ICICRRKRRQEK--SSMHMEEIEDAEFSFMKDRRCLQRETDASENIRHYDQSL------------ 1021

  Fly  1054 GSAPKSPPRWPIRPGVMLHVSSNTKENLTVNRMTVKPNVSGNRGDMSQLSAQLSAALNGSRDNSD 1118
                    ||.||                                                    
Mosquito  1022 --------RWRIR---------------------------------------------------- 1026

  Fly  1119 GTILTEISAVSGENEASNLSILEVTNRKKATVPSTIRNVSTAEGEIISSKTHSAGHIALDHVWSL 1183
                                                                            .
Mosquito  1027 ----------------------------------------------------------------R 1027

  Fly  1184 IFKKSDDRTRDSQRSHVGLLQTFWRGLGAKESTSGFESQHRLKGIRCSGSVTYKKAKETVHSTSD 1248
            .|:|         |:.:.||:                       |..|..:||.|..:|:.:...
Mosquito  1028 FFEK---------RNSIDLLR-----------------------ISTSNVITYVKKPQTIPTEDP 1060

  Fly  1249 AASNGESSLTKRPNNCQPSVSIQLQSNMEEKTSKFVLKDERNNSSTEVENIPCNMVPSITR-GSS 1312
            :......|.........|:.:..                   :::|.......|.:|:... .:|
Mosquito  1061 SPPTSTPSAAAAAAPATPTAATA-------------------DNATATGTTTTNALPTTADCAAS 1106

  Fly  1313 IESPQRPAPSSLPLKNFLNVTSWGCSGNSTMVPSHILANEQIHDKSSSLREPLTEPGEYENLPFH 1377
            ..:|::..|.:..:         |..|.:..||....|...:..:||:......|||||||||||
Mosquito  1107 ATAPEQAGPGAARV---------GVDGGNANVPEAGTAVGGVTGESSTAGGSQIEPGEYENLPFH 1162

  Fly  1378 GLQTAPNKFSTTPTNFNNNTNAVRVAQRPKELIGNINQPSVGLYQDCQATHDPLLY--HQKYFCD 1440
            ||||.|.|.....||                |..::...:..|...|..|| |..|  :|| .|.
Mosquito  1163 GLQTPPKKAMLCKTN----------------LAPSLKHHNKTLTPSCFPTH-PYNYINYQK-DCQ 1209

  Fly  1441 QDALN---DQRSQYTTMHRPPNNVQYNQSLFKPDSNLQDQHNLSNCISKSYTEYYQQHQRSEKLQ 1502
            :..|.   ....|::.:..||      .|..:|.| |.|     :|                   
Mosquito  1210 KGGLQAPLHPTLQHSGLPAPP------PSSGEPPS-LDD-----SC------------------- 1243

  Fly  1503 MIFPQGASKELNSNSLCNTDH-TPHSALVNINLRKYDRTEEELLGNMPRARHRKGTLNVENKFYS 1566
                  .|.|....||.|:|. :.||..:. ..|...|:.|:.|            :::|.    
Mosquito  1244 ------KSAERKLASLDNSDTLSSHSFTIG-GTRSMKRSSEKKL------------IDLET---- 1285

  Fly  1567 LKHLGGIEVRNQDLDKDYPIGGTTSSTPSATDDSSLSKCKIHNSLGCNRLCNVGTNVQPMRVYDP 1631
                  :....::|.....|..||:.||..                                  |
Mosquito  1286 ------VTPLYENLTDSIQIHETTAPTPLV----------------------------------P 1310

  Fly  1632 PGYQNMVLERADDQ---ITLSKKDECNLATVQTHTHPGKDKIKNHHHWIHQHREKKDEGLGSDFH 1693
            || :.::||....:   |:|.|              ||:                  :| ||.  
Mosquito  1311 PG-KPLILEGPHQERYRISLKK--------------PGR------------------KG-GSS-- 1339

  Fly  1694 QLEPERISIYRSDSGISNSSYESQFSKPKMATLNSSSGPLVRKYAHRN---IKVH---------N 1746
                      ||:|.:|||.|:.  .||..|       |..||||..|   .|.|         :
Mosquito  1340 ----------RSNSAVSNSYYDC--IKPIPA-------PRHRKYASTNSLVSKAHPGGGGGGGGH 1385

  Fly  1747 NVFNTSNVTESEAQLDDSSTLHQSCTVQSFAPSHCNRPQPRNRYSEETTK--NECEQHQLGHQSL 1809
            .:........|.::||               |.:.|.|.......|.:.:  ::.|....||:.:
Mosquito  1386 GLKAYGGNGGSSSRLD---------------PIYMNLPFGNKGGHESSLRLHSDTESGSEGHRGI 1435

  Fly  1810 RPASTPSECISLDTSSRSEYIMSTVPAQSDSVETPNEKIQMLAINPLLVKNWNNESYTGNKINKK 1874
            .....|.:...|:.:.....|:  :|.:...|::   :.|...||.||.|:              
Mosquito  1436 ADYPVPRDNHYLEITQHQTRIV--IPRELFPVDS---REQQAKINQLLRKS-------------- 1481

  Fly  1875 QRRQTINNPYEHIQSHPYARPGDVCEVSRKAQSNSSEAFKTYNYGSKSNSSAPQTAAPEHSKVKN 1939
                          ..|...|..:                       :..|.|.|..|..|...:
Mosquito  1482 --------------GAPPVPPALL-----------------------ATGSTPSTTTPSSSSTSS 1509

  Fly  1940 ATKICKKNGIGANREHYEGMLASKHIQGSRLGSLADIDDFPSQGPLNALVGNPADCLVARRPIRL 2004
            ..                                                        :||.|:|
Mosquito  1510 TN--------------------------------------------------------SRRHIKL 1518

  Fly  2005 PLRKHHTFHFQSTQTANGKLQQLR----------------------------------------- 2028
            ||:|||:|:|||:||....::.|:                                         
Mosquito  1519 PLQKHHSFNFQSSQTVEATVRDLKIKSHSISSKTLRDYRGSSSGQRNGQSNGTSTLNHHHHHSHH 1583

  Fly  2029 ---------------ERLQLQLHESRKVDQEK---------FPLVFDALELSEKHAFKPISPIPS 2069
                           ::.|.|.|:.::..|::         ||  :|...:    |||||:|:|:
Mosquito  1584 TGMLHENDSENEYYDQQQQEQQHQHQQQQQQQQHRHRAASHFP--YDTSTV----AFKPITPVPT 1642

  Fly  2070 LNNSAVQSTGEQKQVD 2085
             :.:|:.:|..:|.|:
Mosquito  1643 -STTAIITTTNRKSVN 1657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 V-set 44..152 CDD:462230 46/109 (42%)
Ig strand B 183..187 CDD:409353 1/3 (33%)
Ig <185..248 CDD:472250 22/62 (35%)
Ig strand C 197..201 CDD:409353 1/3 (33%)
Ig strand E 225..229 CDD:409353 1/3 (33%)
Ig strand F 239..244 CDD:409353 1/4 (25%)
Ig strand G 253..256 CDD:409353 0/2 (0%)
Ig 277..354 CDD:472250 40/76 (53%)
Ig strand B 283..287 CDD:409353 2/3 (67%)
Ig strand C 297..301 CDD:409353 2/3 (67%)
Ig strand E 333..337 CDD:409353 1/3 (33%)
Ig strand F 347..352 CDD:409353 2/4 (50%)
Ig_3 376..456 CDD:464046 39/79 (49%)
Ig 676..779 CDD:472250 56/102 (55%)
Ig strand B 689..693 CDD:409353 1/3 (33%)
Ig strand C 702..706 CDD:409353 2/3 (67%)
Ig strand E 734..741 CDD:409353 4/6 (67%)
Ig strand F 762..767 CDD:409353 4/4 (100%)
Ig <811..869 CDD:472250 27/57 (47%)
Ig strand C 820..824 CDD:143205 0/3 (0%)
Ig strand F 849..854 CDD:143205 3/4 (75%)
Ig strand G 862..865 CDD:143205 0/2 (0%)
PTZ00112 1747..>1940 CDD:240274 28/194 (14%)
LOC1280362XP_061509780.1 None

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