DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrm and LOC1279073

DIOPT Version :10

Sequence 1:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster
Sequence 2:XP_061518126.1 Gene:LOC1279073 / 1279073 VectorBaseID:AGAMI1_008509 Length:982 Species:Anopheles gambiae


Alignment Length:1069 Identity:219/1069 - (20%)
Similarity:362/1069 - (33%) Gaps:336/1069 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MALRQSAKD--VAKSNCVAVRSSISLSLVLVLCLALVDSSTAQVDTTISQQESQSVVLPCPVDAE 66
            |.:|:..|.  |.::.|:.|.:.|.:.....|..|.||.......:.|...|.:.:.||||:.|.
Mosquito     2 MKMRRKMKRNIVNQAFCLVVINIIIVQYASGLQQAAVDKEKHVKSSEIQAVEGRKISLPCPLSAP 66

  Fly    67 KCGKLHSLNWFKGDDRI-------AAMLLGDSNVTSVNKEFDERV--TVEQNPYRLVIKDLKIAD 122
            ...|::.:.|||.|..|       ....|..:...|..:.|..|.  ..:.:|..|.|:|::..|
Mosquito    67 SRDKVYMVLWFKDDAGIPLYSFDVRGKPLQQARHWSAPEIFGPRAHFNTDTDPATLDIQDVRRHD 131

  Fly   123 EDIYLCDTTFFIPEETCDNFNGYRIELRVLVPPTEVVILDAKGDRIKNGSVVGPMQERQSLKATC 187
            |.:|.|...|     .......:|..|.:::.|...|:|...|.:: |.|.:||.:|...:..||
Mosquito   132 EGVYRCRVDF-----RTSQTQSFRYNLSIIILPEHPVVLSQWGQQL-NSSKLGPKEEGDDIVLTC 190

  Fly   188 TVRNTRPQPEVSW-FRGTKRLTTYSPTHDLVDGLYT----STLE--LDW-TLSREDLAQDIECRV 244
            .|...||||.|.| ..|.           |||..|.    ..:|  |.| .:.|.||.....|:.
Mosquito   191 RVVGGRPQPSVKWLINGI-----------LVDEQYEHNSGDVIENRLLWPAIQRSDLNSIFTCQA 244

  Fly   245 KSAAIQNVTVTKFSVDLQVRPTSIDINGVKHHTVQGSKVVLTCDIHGARPAVNLTWYNTTTIISS 309
            .:..:.....:.|.:||.::|.|:.|...:...|...:..::|:..|:||...:|||       .
Mosquito   245 TNTLLVEPKESSFVLDLHLKPLSVKIMNPQTPLVADRRYEISCESVGSRPNAIITWY-------K 302

  Fly   310 GENEITEVRSKSLEKSDGTFHTQSELIFNATRFENDRVFRCEAENIVLQINREKP------ISSA 368
            |:.::...:.:.|..:     |:|||.|..|..::.:...|.|||         |      :.::
Mosquito   303 GKRQLRRAKEEILNNT-----TRSELSFVPTTEDDGKQITCRAEN---------PNVTGLFLETS 353

  Fly   369 LTLEVLYPPVVKV----SPSAITANTSEIVLLNCEYFANPASLTQVEWYRNDILVNVNDTTHYKG 429
            ..:||:|||:|.:    :.||......:.|...|...||| ...::.|..:.:::..|.|.....
Mosquito   354 WKIEVVYPPIVSLRLGSTLSADDIKEGDDVYFECHVQANP-PWRKLHWLHDGVMITHNATARVIR 417

  Fly   430 GNSENVALVIKSTEKEDIGNYSCQLSNNIGKGTSDQKINLDVQYAPTV-------------EILM 481
            .|.   :||::...:...|||||...|..|:..|:| :.|.|:|||..             |.|.
Mosquito   418 SNQ---SLVLQKVTRNSSGNYSCSAINAEGETVSNQ-LALRVKYAPVCATDRIIIVGAFRSESLQ 478

  Fly   482 IP-----EGPVKE----SDESNVTLFCNVLDANPSVLTKVRWYANS--TLLKELPDCEETREDLC 535
            ||     :.|.::    .:.|..||          .:.|.|:..|.  :||..:|..::.     
Mosquito   479 IPCEVHADPPPRQFNWKFNNSGETL----------KIGKERYVKNGSISLLNYIPVSDQD----- 528

  Fly   536 HIDPSKLLLESIGRGFFYNYSCEGFNAAG---W-----------------------GPRSEDKEL 574
                            :...:|.|.|..|   |                       ...|.:.:.
Mosquito   529 ----------------YGTLTCWGQNEVGTQDWPCFFQVVLAGLPSAVKNCSINNQTQHSVEVQC 577

  Fly   575 LVHYEPGPAALSHFPLVAVKKKSVTFS-CSVDDPGF-PESNRFRWLRGGRGPLQDIVTKDWTVEP 637
            |..|:.|...:....:::.:...|.:: .:.|:|.| .||            |::::......:.
Mosquito   578 LPGYDGGLPQIFILEVISSRTGRVRYNVTNPDEPYFLVES------------LENLIHYGGAYDD 630

  Fly   638 VGLDSRTNYSCYAYNEGGK-------------------GVMATVNLEVHAP-------------- 669
            :|.|:......||.|:.|:                   ||:.:.:|:..:|              
Mosquito   631 IGDDNPLKAIIYAVNQKGRSQGIVVKDFYLESAVENRAGVLTSNSLDSISPILFGVLLTLLVLCF 695

  Fly   670 -----PFFIKNLPPYTGILHSSPNATLTCR-------------IECVPRCDISWQ---------- 706
                 .::||.....|.|.:.|.:.....:             .:..||    ||          
Mosquito   696 VIFVRVYYIKATATSTTITNVSNDLVSNSKQGNNKQDTLAKKSAKQSPR----WQQGNSGGGVGG 756

  Fly   707 ----------------------KDGVPIERNDSRYFIKEKYMDASPA----TGDFESMLSVLHFN 745
                                  |.|.|....|      |:..|..||    :.|.||    :.||
Mosquito   757 VGGYGGTGTGCGLIVDGRSRDEKLGAPDGMED------ERDPDVIPAQFAVSNDSES----VSFN 811

  Fly   746 MPNWPDSKFNIEADNANY-------------------SCVSTG------NIVGGSIRSRTYF--- 782
            ...||:..|.....|.:.                   :.|:|.      |..|.||:...|:   
Mosquito   812 SSKWPNGNFYDRYPNHDIRPSELLLPSAAGTLGPTATATVTTNQLHPNVNQPGDSIKLGPYYTPS 876

  Fly   783 -------GIEYAPENTTVSENIVYVQEDTIPGRVICKSRANPEPS-------------YKWIFKN 827
                   |...||..|..          |:.|..:..:.::|..|             |......
Mosquito   877 GLLTGGGGGPTAPGTTGT----------TLAGAYLSPAGSHPLDSGGLDGVGVGGPLMYSSAGSG 931

  Fly   828 ETIA----------NGNALIINTAMNRND 846
            :|:.          ||.|....|.:|.||
Mosquito   932 QTLVGNHHQSSLLPNGTAGSTGTGVNPND 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrmNP_001246890.1 V-set 44..152 CDD:462230 28/116 (24%)
Ig strand B 183..187 CDD:409353 0/3 (0%)
Ig <185..248 CDD:472250 21/70 (30%)
Ig strand C 197..201 CDD:409353 2/4 (50%)
Ig strand E 225..229 CDD:409353 2/5 (40%)
Ig strand F 239..244 CDD:409353 1/4 (25%)
Ig strand G 253..256 CDD:409353 0/2 (0%)
Ig 277..354 CDD:472250 18/76 (24%)
Ig strand B 283..287 CDD:409353 0/3 (0%)
Ig strand C 297..301 CDD:409353 1/3 (33%)
Ig strand E 333..337 CDD:409353 3/3 (100%)
Ig strand F 347..352 CDD:409353 1/4 (25%)
Ig_3 376..456 CDD:464046 21/83 (25%)
Ig 676..779 CDD:472250 30/176 (17%)
Ig strand B 689..693 CDD:409353 0/3 (0%)
Ig strand C 702..706 CDD:409353 0/3 (0%)
Ig strand E 734..741 CDD:409353 3/6 (50%)
Ig strand F 762..767 CDD:409353 0/23 (0%)
Ig <811..869 CDD:472250 11/59 (19%)
Ig strand C 820..824 CDD:143205 2/16 (13%)
Ig strand F 849..854 CDD:143205
Ig strand G 862..865 CDD:143205
PTZ00112 1747..>1940 CDD:240274
LOC1279073XP_061518126.1 None
Blue background indicates that the domain is not in the aligned region.

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