DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mes2 and CG4404

DIOPT Version :9

Sequence 1:NP_730768.1 Gene:Mes2 / 40514 FlyBaseID:FBgn0037207 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:91 Identity:21/91 - (23%)
Similarity:42/91 - (46%) Gaps:1/91 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LKLIQMVHDNPILWDSRLPNFKGAEEEKNRAWEHIGREFNAPGRRVARAFKSLRESYRRELAHVK 125
            ::.:|.|.:.|.||:...|.: ..:|:..|||:.:..:.....|.....::::|.|:.|.|...:
  Fly    16 VRFVQFVENQPCLWNYTHPGY-SKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSLKLAR 79

  Fly   126 LMGNGFKPKWSLYEAMDFLRDVIRER 151
            ......|.|:.|.:.:.||....:.|
  Fly    80 TQTGRGKRKYYLSKYLQFLVPFTKSR 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mes2NP_730768.1 MADF 62..149 CDD:214738 20/86 (23%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 20/86 (23%)
BESS 267..301 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438489
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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